52 homologs were found in PanDaTox collection
for query gene Bcav_4137 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_4137  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  100 
 
 
172 aa  346  9e-95  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.428154  normal 
 
 
-
 
NC_009380  Strop_1727  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  60.26 
 
 
165 aa  185  3e-46  Salinispora tropica CNB-440  Bacteria  normal  0.129444  normal  0.522708 
 
 
-
 
NC_011060  Ppha_0917  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.38 
 
 
170 aa  61.6  0.000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.688385  n/a   
 
 
-
 
NC_008639  Cpha266_1068  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.61 
 
 
172 aa  60.1  0.00000001  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.000000115819  n/a   
 
 
-
 
NC_010803  Clim_1131  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.16 
 
 
190 aa  57  0.0000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2360  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.94 
 
 
150 aa  56.2  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010338  Caul_0850  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.8 
 
 
155 aa  54.3  0.0000008  Caulobacter sp. K31  Bacteria  normal  0.119424  normal  0.155123 
 
 
-
 
NC_007348  Reut_B5702  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.91 
 
 
150 aa  53.1  0.000002  Ralstonia eutropha JMP134  Bacteria  normal  0.884169  n/a   
 
 
-
 
NC_010338  Caul_3763  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.67 
 
 
166 aa  52  0.000004  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.88 
 
 
150 aa  50.8  0.000008  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.000271809  n/a   
 
 
-
 
NC_007404  Tbd_0006  hypothetical protein  39.39 
 
 
151 aa  50.4  0.00001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1056  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  36.47 
 
 
135 aa  49.3  0.00002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.991641  n/a   
 
 
-
 
NC_008781  Pnap_4000  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.46 
 
 
150 aa  49.3  0.00003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.166717  normal 
 
 
-
 
NC_008942  Mlab_1007  hypothetical protein  38.33 
 
 
154 aa  48.5  0.00004  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.596538 
 
 
-
 
NC_011901  Tgr7_1947  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.62 
 
 
155 aa  48.9  0.00004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.000031905  n/a   
 
 
-
 
NC_013510  Tcur_1069  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.33 
 
 
158 aa  48.9  0.00004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2456  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.44 
 
 
171 aa  47.8  0.00008  Caulobacter sp. K31  Bacteria  normal  0.502325  normal  0.600278 
 
 
-
 
NC_013526  Tter_2143  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.34 
 
 
137 aa  47  0.0001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0787  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.85 
 
 
134 aa  47  0.0001  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.277304 
 
 
-
 
NC_014165  Tbis_0505  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.38 
 
 
125 aa  45.8  0.0003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2179  pyridoxamine 5'-phosphate oxidase-related FMN- binding  26.97 
 
 
151 aa  45.4  0.0004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0827  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  29.47 
 
 
163 aa  45.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2731  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.8 
 
 
205 aa  45.1  0.0005  Eggerthella lenta DSM 2243  Bacteria  normal  0.560885  normal 
 
 
-
 
NC_014165  Tbis_0846  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  31.58 
 
 
125 aa  44.7  0.0006  Thermobispora bispora DSM 43833  Bacteria  normal  0.303881  normal  0.0908937 
 
 
-
 
NC_013889  TK90_2082  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  39.06 
 
 
155 aa  45.1  0.0006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.510158  normal 
 
 
-
 
NC_011769  DvMF_3004  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  36.21 
 
 
153 aa  44.7  0.0007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009664  Krad_0759  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.21 
 
 
133 aa  43.1  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.34478  normal  0.0106192 
 
 
-
 
NC_013093  Amir_4233  pyridoxamine 5'-phosphate oxidase-related FMN- binding  40.35 
 
 
143 aa  43.1  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6357  PPOX class putative F420-dependent enzyme  38.71 
 
 
131 aa  43.1  0.002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.882388 
 
 
-
 
NC_009338  Mflv_2137  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.21 
 
 
147 aa  42.7  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.332773 
 
 
-
 
NC_007964  Nham_1962  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.66 
 
 
158 aa  43.5  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  0.181208  n/a   
 
 
-
 
NC_008751  Dvul_0078  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.29 
 
 
158 aa  42.7  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1357  putative F420-dependent enzyme  34.65 
 
 
153 aa  42.4  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.211634  normal 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  36.67 
 
 
163 aa  42.7  0.003  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_009921  Franean1_1623  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.25 
 
 
132 aa  42.4  0.003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2632  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.92 
 
 
160 aa  42  0.004  Salinispora tropica CNB-440  Bacteria  normal  0.224595  normal  0.27403 
 
 
-
 
NC_013158  Huta_2922  pyridoxamine 5'-phosphate oxidase-related FMN- binding  38.1 
 
 
134 aa  42  0.004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0268055  n/a   
 
 
-
 
NC_008726  Mvan_4567  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.8 
 
 
147 aa  42  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.413715 
 
 
-
 
NC_013595  Sros_0969  hypothetical protein  31.82 
 
 
129 aa  42  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3594  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.34 
 
 
132 aa  42  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0641507  normal 
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.52 
 
 
165 aa  41.6  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_1693  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.03 
 
 
148 aa  41.6  0.005  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00000026689  n/a   
 
 
-
 
NC_008726  Mvan_5737  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.48 
 
 
270 aa  41.6  0.006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.602445 
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  46.67 
 
 
143 aa  41.2  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  36.51 
 
 
141 aa  41.6  0.006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  30.3 
 
 
146 aa  40.8  0.008  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_008146  Mmcs_4058  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32 
 
 
147 aa  41.2  0.008  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0857  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.62 
 
 
267 aa  40.8  0.008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.579175  n/a   
 
 
-
 
NC_008705  Mkms_4133  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32 
 
 
147 aa  41.2  0.008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.907144 
 
 
-
 
NC_009077  Mjls_4287  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32 
 
 
147 aa  41.2  0.008  Mycobacterium sp. JLS  Bacteria  normal  0.251871  normal 
 
 
-
 
NC_014158  Tpau_3814  PPOX class putative F420-dependent enzyme  35.11 
 
 
165 aa  40.8  0.009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3667  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.57 
 
 
175 aa  40.8  0.009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.875413  normal 
 
 
-
 
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