More than 300 homologs were found in PanDaTox collection
for query gene Bcav_2977 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_2977  extracellular solute-binding protein family 1  100 
 
 
415 aa  835    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.576527  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  30.64 
 
 
424 aa  107  6e-22  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  30.71 
 
 
438 aa  100  4e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  26.07 
 
 
447 aa  99  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  23.45 
 
 
423 aa  94.4  3e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  25.13 
 
 
416 aa  92  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  25 
 
 
410 aa  91.3  3e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  25.23 
 
 
443 aa  91.3  3e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  27.07 
 
 
427 aa  88.6  2e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.07 
 
 
447 aa  88.6  2e-16  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  25.77 
 
 
459 aa  88.6  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  26.74 
 
 
422 aa  86.7  6e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  25.07 
 
 
433 aa  85.5  0.000000000000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  25.55 
 
 
410 aa  85.5  0.000000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  25.3 
 
 
410 aa  84.7  0.000000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.57 
 
 
407 aa  84.3  0.000000000000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  23.2 
 
 
411 aa  84  0.000000000000005  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  26.33 
 
 
419 aa  84  0.000000000000005  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  26.98 
 
 
419 aa  83.6  0.000000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  23.48 
 
 
411 aa  83.6  0.000000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  26.65 
 
 
399 aa  83.2  0.000000000000008  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  24.47 
 
 
432 aa  82.8  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  23.25 
 
 
366 aa  82.4  0.00000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  25.99 
 
 
456 aa  82  0.00000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  26.95 
 
 
406 aa  81.3  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  24.58 
 
 
429 aa  81.6  0.00000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.05 
 
 
414 aa  81.3  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  27.34 
 
 
423 aa  81.3  0.00000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  24.72 
 
 
412 aa  80.9  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  26.89 
 
 
441 aa  80.1  0.00000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25.81 
 
 
415 aa  79.7  0.00000000000008  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.95 
 
 
430 aa  79.7  0.00000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013172  Bfae_29320  ABC-type sugar transport system, periplasmic component  25.52 
 
 
443 aa  79.7  0.00000000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  31.7 
 
 
424 aa  79.3  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  24.49 
 
 
421 aa  79.3  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  24.45 
 
 
412 aa  77.8  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  23.81 
 
 
402 aa  77.8  0.0000000000003  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  26.42 
 
 
426 aa  77.4  0.0000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2209  extracellular solute-binding protein family 1  21.82 
 
 
487 aa  76.3  0.0000000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4488  extracellular solute-binding protein family 1  23.46 
 
 
434 aa  75.9  0.000000000001  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.395657  n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  24.21 
 
 
421 aa  75.9  0.000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  26.52 
 
 
437 aa  73.9  0.000000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  27.41 
 
 
430 aa  73.9  0.000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  23.23 
 
 
432 aa  73.6  0.000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  24.18 
 
 
411 aa  73.2  0.000000000007  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  26.69 
 
 
411 aa  73.2  0.000000000009  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  26.69 
 
 
411 aa  72.8  0.000000000009  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  24.86 
 
 
420 aa  72.8  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_008025  Dgeo_0687  extracellular solute-binding protein  22.92 
 
 
407 aa  72.8  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.376534  normal  0.15795 
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  27.9 
 
 
425 aa  72.4  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  29.15 
 
 
433 aa  72  0.00000000002  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  23.15 
 
 
442 aa  71.6  0.00000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0854  extracellular solute-binding protein family 1  24.7 
 
 
398 aa  72  0.00000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.124504  n/a   
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  26.29 
 
 
412 aa  72.4  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  22.35 
 
 
412 aa  71.6  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_011726  PCC8801_4174  extracellular solute-binding protein family 1  24.27 
 
 
426 aa  72.4  0.00000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4213  extracellular solute-binding protein family 1  24.27 
 
 
426 aa  72.4  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.215316  normal 
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  30.39 
 
 
447 aa  72  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7516  extracellular solute-binding protein family 1  25.88 
 
 
452 aa  71.6  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2345  extracellular solute-binding protein family 1  27.16 
 
 
424 aa  71.2  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.822896  normal  0.413258 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  23.24 
 
 
443 aa  71.2  0.00000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  27.16 
 
 
453 aa  71.6  0.00000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  31.07 
 
 
421 aa  71.2  0.00000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_009952  Dshi_3144  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.91 
 
 
460 aa  70.5  0.00000000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2338  maltose-binding periplasmic protein precursor  24.34 
 
 
408 aa  70.1  0.00000000007  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2574  extracellular solute-binding protein family 1  23.56 
 
 
453 aa  70.1  0.00000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  25.81 
 
 
421 aa  69.7  0.00000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_010465  YPK_0378  maltose ABC transporter periplasmic protein  24.94 
 
 
403 aa  69.7  0.00000000009  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3914  maltose ABC transporter periplasmic protein  24.94 
 
 
403 aa  69.7  0.00000000009  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  23.17 
 
 
424 aa  69.7  0.00000000009  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013093  Amir_0348  extracellular solute-binding protein family 1  30.5 
 
 
419 aa  69.7  0.00000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0306  maltose ABC transporter periplasmic protein  24.94 
 
 
403 aa  69.7  0.00000000009  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000110695  n/a   
 
 
-
 
NC_013093  Amir_4241  extracellular solute-binding protein family 1  30.51 
 
 
422 aa  69.3  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  25.73 
 
 
406 aa  69.3  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009636  Smed_1702  extracellular solute-binding protein  31.2 
 
 
422 aa  69.7  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.57478  normal 
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  24.42 
 
 
428 aa  68.9  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  26.58 
 
 
430 aa  69.7  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  23.4 
 
 
416 aa  68.2  0.0000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2082  carbohydrate ABC transporter periplasmic-binding protein  23.49 
 
 
422 aa  68.6  0.0000000002  Yersinia pestis Angola  Bacteria  normal  0.890991  normal  0.0137332 
 
 
-
 
NC_010465  YPK_2280  extracellular solute-binding protein  23.02 
 
 
422 aa  68.6  0.0000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0869  extracellular solute-binding protein  26.28 
 
 
444 aa  68.6  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.509231  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  25.16 
 
 
429 aa  68.6  0.0000000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_009832  Spro_4472  maltose ABC transporter periplasmic protein  27.02 
 
 
397 aa  68.6  0.0000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  24.44 
 
 
486 aa  67.8  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20470  extracellular solute-binding protein family 1  24.15 
 
 
406 aa  67.8  0.0000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000403753  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  24.75 
 
 
427 aa  68.2  0.0000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3883  maltose/maltodextrin ABC transporter periplasmic maltose/maltodextrin-binding protein  26.21 
 
 
411 aa  67.8  0.0000000003  Yersinia pestis Angola  Bacteria  normal  normal  0.265603 
 
 
-
 
NC_010465  YPK_0968  extracellular solute-binding protein  26.21 
 
 
411 aa  68.2  0.0000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.155665  n/a   
 
 
-
 
NC_009708  YpsIP31758_0914  maltose/maltodextrin ABC transporter, periplasmic maltose/maltodextrin-binding protein  26.21 
 
 
411 aa  67.8  0.0000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.459005  n/a   
 
 
-
 
NC_009939  Dgeo_3106  ABC transporter, substrate binding periplasmic component  23.28 
 
 
408 aa  68.2  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  25.34 
 
 
421 aa  67.4  0.0000000005  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_009832  Spro_2297  extracellular solute-binding protein  25.46 
 
 
416 aa  67.4  0.0000000005  Serratia proteamaculans 568  Bacteria  normal  0.33558  normal 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  26.11 
 
 
418 aa  67.4  0.0000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_014165  Tbis_2714  extracellular solute-binding protein family 1  29.17 
 
 
414 aa  67  0.0000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.36636  normal 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  22.9 
 
 
412 aa  67  0.0000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012028  Hlac_2982  trehalose/maltose binding protein  25.87 
 
 
281 aa  66.6  0.0000000007  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009636  Smed_2420  extracellular solute-binding protein  26.72 
 
 
420 aa  66.6  0.0000000008  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.228974 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  28.47 
 
 
431 aa  66.6  0.0000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  26.25 
 
 
414 aa  66.2  0.0000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_007516  Syncc9605_0108  twin-arginine translocation pathway signal  25.75 
 
 
435 aa  66.2  0.000000001  Synechococcus sp. CC9605  Bacteria  normal  normal  0.77402 
 
 
-
 
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