58 homologs were found in PanDaTox collection
for query gene Bcav_0322 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0322  extracellular solute-binding protein family 1  100 
 
 
445 aa  900    Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2834  extracellular solute-binding protein family 1  41.5 
 
 
452 aa  295  1e-78  Beutenbergia cavernae DSM 12333  Bacteria  decreased coverage  0.00451533  normal 
 
 
-
 
NC_012669  Bcav_4198  extracellular solute-binding protein family 1  38.31 
 
 
454 aa  261  1e-68  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.850569  normal 
 
 
-
 
NC_010001  Cphy_0529  extracellular solute-binding protein  24.82 
 
 
464 aa  97.4  5e-19  Clostridium phytofermentans ISDg  Bacteria  normal  0.361956  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  26.21 
 
 
422 aa  70.9  0.00000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  22.82 
 
 
479 aa  70.1  0.00000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_013093  Amir_2920  extracellular solute-binding protein family 1  25.69 
 
 
424 aa  67.8  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3534  extracellular solute-binding protein family 1  32.16 
 
 
445 aa  59.3  0.0000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.582574 
 
 
-
 
NC_010001  Cphy_1392  extracellular solute-binding protein  23.55 
 
 
449 aa  57.4  0.0000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000859872  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  25.29 
 
 
421 aa  56.2  0.000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.1 
 
 
427 aa  53.9  0.000005  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  25.76 
 
 
420 aa  53.1  0.000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.43 
 
 
430 aa  53.1  0.000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  28.12 
 
 
429 aa  52.8  0.00001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  26.36 
 
 
419 aa  52.8  0.00001  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  23.72 
 
 
423 aa  52.4  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  31.45 
 
 
442 aa  52.4  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_014165  Tbis_0069  extracellular solute-binding protein family 1  27.07 
 
 
448 aa  51.6  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3027  extracellular solute-binding protein  23.47 
 
 
467 aa  51.2  0.00004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_00790  ABC-type sugar transport system, periplasmic component  28.93 
 
 
437 aa  49.7  0.0001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.312494  normal  0.191801 
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  26.03 
 
 
406 aa  48.9  0.0002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  28.14 
 
 
431 aa  48.9  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013757  Gobs_2796  extracellular solute-binding protein family 1  25 
 
 
468 aa  48.1  0.0003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3793  extracellular solute-binding protein family 1  27.65 
 
 
459 aa  48.1  0.0003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.46649  normal 
 
 
-
 
NC_011886  Achl_3566  extracellular solute-binding protein family 1  24.5 
 
 
426 aa  47.8  0.0004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  24.64 
 
 
454 aa  47.8  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  30.88 
 
 
429 aa  47.8  0.0004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_012669  Bcav_2603  extracellular solute-binding protein family 1  27.09 
 
 
445 aa  47.4  0.0005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0144502  normal 
 
 
-
 
NC_013595  Sros_6192  ABC-type sugar transport system periplasmic component-like protein  28.04 
 
 
431 aa  47.4  0.0005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0222852  normal 
 
 
-
 
NC_013595  Sros_5820  ABC-type sugar transport system periplasmic component-like protein  23.64 
 
 
447 aa  47.4  0.0006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.8778 
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  25.26 
 
 
441 aa  47.4  0.0006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  24.74 
 
 
411 aa  47  0.0007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  29.95 
 
 
434 aa  47  0.0007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0322  extracellular solute-binding protein family 1  34.09 
 
 
435 aa  47  0.0008  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_01550  ABC-type sugar transport system, periplasmic component  26.98 
 
 
438 aa  46.2  0.001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  27.37 
 
 
427 aa  45.1  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_014210  Ndas_2345  extracellular solute-binding protein family 1  23.94 
 
 
424 aa  45.4  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.822896  normal  0.413258 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  27.64 
 
 
447 aa  45.4  0.002  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_009972  Haur_4033  extracellular solute-binding protein  23.5 
 
 
429 aa  45.4  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3808  extracellular solute-binding protein family 1  29.45 
 
 
427 aa  44.7  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.750227 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  28.57 
 
 
433 aa  44.7  0.003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  29.33 
 
 
413 aa  45.1  0.003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_0171  extracellular solute-binding protein family 1  26.04 
 
 
468 aa  45.1  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  24.42 
 
 
450 aa  44.7  0.003  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_012669  Bcav_3557  extracellular solute-binding protein family 1  28.26 
 
 
458 aa  45.1  0.003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  32.98 
 
 
434 aa  44.3  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_011899  Hore_04270  extracellular solute-binding protein family 1  24.53 
 
 
418 aa  44.7  0.004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  29.08 
 
 
412 aa  44.3  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  23.72 
 
 
424 aa  44.3  0.005  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  25.25 
 
 
444 aa  43.9  0.005  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  25.61 
 
 
443 aa  43.9  0.006  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_010001  Cphy_0291  extracellular solute-binding protein  21.82 
 
 
449 aa  43.5  0.007  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3052  extracellular solute-binding protein family 1  30.3 
 
 
427 aa  43.5  0.007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.854825  normal  0.208902 
 
 
-
 
NC_009523  RoseRS_2315  extracellular solute-binding protein  22.98 
 
 
925 aa  43.5  0.007  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.05 
 
 
411 aa  43.5  0.007  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  26.95 
 
 
422 aa  43.5  0.008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_013525  Tter_0265  extracellular solute-binding protein family 1  21.52 
 
 
510 aa  43.5  0.008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  23.84 
 
 
483 aa  43.1  0.009  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
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