15 homologs were found in PanDaTox collection
for query gene Bamb_6594 on replicon NC_008385
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008385  Bamb_6594  plasmid stabilization system protein  100 
 
 
104 aa  209  7.999999999999999e-54  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.000313178  n/a   
 
 
-
 
NC_010002  Daci_5833  plasmid stabilization system protein  76 
 
 
105 aa  158  3e-38  Delftia acidovorans SPH-1  Bacteria  normal  0.24244  normal 
 
 
-
 
NC_012792  Vapar_5511  plasmid stabilization system  77.78 
 
 
103 aa  154  6e-37  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2290  plasmid stabilization system protein  79.81 
 
 
109 aa  152  2e-36  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.0061658  normal  0.149098 
 
 
-
 
NC_012880  Dd703_0304  plasmid stabilization system  56 
 
 
110 aa  112  2.0000000000000002e-24  Dickeya dadantii Ech703  Bacteria  normal  0.0426013  n/a   
 
 
-
 
NC_012880  Dd703_1994  plasmid stabilization system  56 
 
 
110 aa  112  2.0000000000000002e-24  Dickeya dadantii Ech703  Bacteria  normal  0.947377  n/a   
 
 
-
 
NC_010338  Caul_0773  plasmid stabilization system protein  41.46 
 
 
86 aa  70.9  0.000000000006  Caulobacter sp. K31  Bacteria  normal  normal  0.211635 
 
 
-
 
NC_010725  Mpop_5181  plasmid stabilization system  33.33 
 
 
101 aa  57.8  0.00000005  Methylobacterium populi BJ001  Bacteria  normal  0.161785  normal 
 
 
-
 
NC_011830  Dhaf_3446  plasmid stabilization system  33.96 
 
 
107 aa  49.7  0.00001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0746  toxin-antitoxin system, toxin component, RelE family  30 
 
 
110 aa  44.7  0.0004  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.00000000854899 
 
 
-
 
NC_008346  Swol_0151  hypothetical protein  28.57 
 
 
112 aa  44.7  0.0005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.000000158576  n/a   
 
 
-
 
NC_009483  Gura_1487  plasmid stabilization system protein  29.52 
 
 
107 aa  42  0.003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_3610  plasmid stabilization system  31.31 
 
 
101 aa  42  0.003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2504  plasmid stabilization system  31.31 
 
 
101 aa  42  0.003  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.580101 
 
 
-
 
NC_007498  Pcar_1790  putative plasmid stabilization system protein protein  31.73 
 
 
109 aa  41.6  0.004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
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