More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_1366 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009074  BURPS668_1674  methyl-accepting chemotaxis protein  74.73 
 
 
647 aa  702    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1464  putative methyl-accepting chemotaxis protein  74.55 
 
 
558 aa  702    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1423  methyl-accepting chemotaxis sensory transducer  92.1 
 
 
557 aa  902    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0931  methyl-accepting chemotaxis protein, putative  74.73 
 
 
653 aa  701    Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0745  putative methyl-accepting chemotaxis protein  74.55 
 
 
558 aa  702    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1850  methyl-accepting chemotaxis protein, putative  74.91 
 
 
653 aa  704    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4589  methyl-accepting chemotaxis sensory transducer  94.82 
 
 
557 aa  862    Burkholderia sp. 383  Bacteria  normal  0.17969  normal 
 
 
-
 
NC_007651  BTH_I2629  methyl-accepting chemotaxis protein  74.91 
 
 
558 aa  691    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  70.38 
 
 
553 aa  708    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  69.29 
 
 
558 aa  721    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_1696  methyl-accepting chemotaxis protein  74.91 
 
 
647 aa  704    Burkholderia pseudomallei 1106a  Bacteria  normal  0.0745582  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  68.76 
 
 
573 aa  720    Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_008060  Bcen_0963  methyl-accepting chemotaxis sensory transducer  92.28 
 
 
557 aa  897    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0423677  n/a   
 
 
-
 
NC_010084  Bmul_1870  methyl-accepting chemotaxis sensory transducer  88.24 
 
 
562 aa  863    Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00389756 
 
 
-
 
NC_008390  Bamb_1327  methyl-accepting chemotaxis sensory transducer  99.46 
 
 
558 aa  1079    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1366  methyl-accepting chemotaxis sensory transducer  100 
 
 
558 aa  1082    Burkholderia ambifaria MC40-6  Bacteria  normal  0.735429  normal  0.799433 
 
 
-
 
NC_008542  Bcen2424_1445  methyl-accepting chemotaxis sensory transducer  92.28 
 
 
557 aa  896    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0417  putative methyl-accepting chemotaxis protein  74.55 
 
 
558 aa  702    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  48.7 
 
 
594 aa  398  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
613 aa  392  1e-108  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
634 aa  365  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
634 aa  365  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  63.42 
 
 
513 aa  356  7.999999999999999e-97  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.42 
 
 
513 aa  356  7.999999999999999e-97  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  61.47 
 
 
521 aa  352  8.999999999999999e-96  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  60.88 
 
 
521 aa  351  2e-95  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  46.6 
 
 
579 aa  350  3e-95  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
532 aa  350  4e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  62.24 
 
 
512 aa  348  1e-94  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  64.17 
 
 
598 aa  347  3e-94  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
544 aa  345  8.999999999999999e-94  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  62.12 
 
 
546 aa  345  2e-93  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  62.12 
 
 
511 aa  343  2.9999999999999997e-93  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.29 
 
 
515 aa  343  2.9999999999999997e-93  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  62.12 
 
 
526 aa  343  4e-93  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  62.12 
 
 
546 aa  343  4e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  64.29 
 
 
515 aa  343  4e-93  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  62.12 
 
 
546 aa  343  4e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  62.12 
 
 
546 aa  343  4e-93  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  62.12 
 
 
546 aa  343  4e-93  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  60.92 
 
 
611 aa  341  2e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  64.4 
 
 
545 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  64.4 
 
 
545 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  64.4 
 
 
545 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  62.07 
 
 
627 aa  340  5.9999999999999996e-92  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  62.69 
 
 
515 aa  338  1.9999999999999998e-91  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  66.89 
 
 
513 aa  338  1.9999999999999998e-91  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  55.31 
 
 
576 aa  337  2.9999999999999997e-91  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  65.47 
 
 
549 aa  337  3.9999999999999995e-91  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  59.05 
 
 
585 aa  336  7e-91  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  56.76 
 
 
584 aa  333  4e-90  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
519 aa  332  1e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  58.58 
 
 
579 aa  331  3e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
578 aa  329  8e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
532 aa  328  1.0000000000000001e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  55.86 
 
 
573 aa  328  1.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012917  PC1_0416  methyl-accepting chemotaxis sensory transducer  41.15 
 
 
525 aa  328  2.0000000000000001e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.158805  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
581 aa  326  6e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_013421  Pecwa_0495  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
525 aa  326  7e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
520 aa  325  9e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  59.28 
 
 
586 aa  323  4e-87  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  60.58 
 
 
559 aa  323  5e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  55.04 
 
 
578 aa  323  6e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
535 aa  322  9.999999999999999e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5592  methyl-accepting chemotaxis sensory transducer  59.76 
 
 
567 aa  322  9.999999999999999e-87  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
580 aa  322  9.999999999999999e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  65.64 
 
 
615 aa  321  1.9999999999999998e-86  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  65.64 
 
 
615 aa  321  1.9999999999999998e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  59.15 
 
 
552 aa  321  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  61.41 
 
 
520 aa  321  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  65.16 
 
 
608 aa  321  3e-86  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  65.16 
 
 
608 aa  321  3e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
589 aa  320  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  58.97 
 
 
517 aa  320  5e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  55.02 
 
 
579 aa  319  7e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  56.12 
 
 
542 aa  318  2e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.01 
 
 
636 aa  318  2e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.35 
 
 
667 aa  317  4e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
661 aa  316  6e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
581 aa  315  9.999999999999999e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  57.18 
 
 
542 aa  315  9.999999999999999e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  57.33 
 
 
541 aa  315  9.999999999999999e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  58.19 
 
 
515 aa  315  1.9999999999999998e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  59.46 
 
 
519 aa  315  1.9999999999999998e-84  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  57 
 
 
597 aa  314  1.9999999999999998e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
556 aa  314  2.9999999999999996e-84  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  61.62 
 
 
557 aa  313  3.9999999999999997e-84  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  61.62 
 
 
557 aa  313  3.9999999999999997e-84  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  61.62 
 
 
557 aa  313  3.9999999999999997e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
589 aa  313  3.9999999999999997e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
566 aa  313  3.9999999999999997e-84  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
617 aa  313  4.999999999999999e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  64.11 
 
 
600 aa  313  5.999999999999999e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  58.47 
 
 
518 aa  313  6.999999999999999e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_012912  Dd1591_3613  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
530 aa  313  6.999999999999999e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  63 
 
 
592 aa  313  6.999999999999999e-84  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  61.67 
 
 
752 aa  313  7.999999999999999e-84  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  54.41 
 
 
519 aa  312  9e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  59.87 
 
 
551 aa  311  1e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  54.31 
 
 
583 aa  312  1e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
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