95 homologs were found in PanDaTox collection
for query gene BamMC406_1164 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010551  BamMC406_1164  triphosphoribosyl-dephospho-CoA synthase MdcB  100 
 
 
288 aa  551  1e-156  Burkholderia ambifaria MC40-6  Bacteria  normal  0.198403  normal  0.179509 
 
 
-
 
NC_008390  Bamb_1152  triphosphoribosyl-dephospho-CoA synthase  96.53 
 
 
288 aa  494  1e-139  Burkholderia ambifaria AMMD  Bacteria  normal  0.536064  n/a   
 
 
-
 
NC_010508  Bcenmc03_1246  triphosphoribosyl-dephospho-CoA synthase MdcB  88.19 
 
 
288 aa  449  1e-125  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0788656 
 
 
-
 
NC_007510  Bcep18194_A4417  triphosphoribosyl-dephospho-CoA synthase  87.5 
 
 
288 aa  448  1e-125  Burkholderia sp. 383  Bacteria  normal  0.234265  normal 
 
 
-
 
NC_008542  Bcen2424_1274  triphosphoribosyl-dephospho-CoA synthase  87.85 
 
 
288 aa  443  1e-123  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0492146  n/a   
 
 
-
 
NC_008060  Bcen_0793  triphosphoribosyl-dephospho-CoA synthase  87.85 
 
 
288 aa  443  1e-123  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.501312  n/a   
 
 
-
 
NC_010084  Bmul_2045  triphosphoribosyl-dephospho-CoA synthase MdcB  86.23 
 
 
289 aa  438  9.999999999999999e-123  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2798  ATP:dephospho-CoA triphosphoribosyl transferase  74.53 
 
 
330 aa  309  4e-83  Burkholderia thailandensis E264  Bacteria  normal  0.160388  n/a   
 
 
-
 
NC_009074  BURPS668_1457  triphosphoribosyl-dephospho-CoA synthase MdcB  72.43 
 
 
452 aa  303  3.0000000000000004e-81  Burkholderia pseudomallei 668  Bacteria  normal  0.0818949  n/a   
 
 
-
 
NC_011894  Mnod_3156  triphosphoribosyl-dephospho-CoA synthase MdcB  66.05 
 
 
287 aa  298  9e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1261  triphosphoribosyl-dephospho-CoA synthase  74.06 
 
 
714 aa  290  2e-77  Burkholderia mallei SAVP1  Bacteria  normal  0.111669  n/a   
 
 
-
 
NC_008836  BMA10229_A0609  triphosphoribosyl-dephospho-CoA synthase  74.06 
 
 
705 aa  290  2e-77  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1487  triphosphoribosyl-dephospho-CoA synthase  73.68 
 
 
431 aa  289  3e-77  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1589  triphosphoribosyl-dephospho-CoA synthase  73.68 
 
 
426 aa  289  4e-77  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0544  triphosphoribosyl-dephospho-CoA synthase MdcB  74.06 
 
 
356 aa  289  5.0000000000000004e-77  Burkholderia mallei NCTC 10247  Bacteria  normal  0.687698  n/a   
 
 
-
 
NC_006348  BMA3032  triphosphoribosyl-dephospho-CoA synthase  74.06 
 
 
356 aa  289  5.0000000000000004e-77  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0029  triphosphoribosyl-dephospho-CoA synthase MdcB  61.25 
 
 
286 aa  270  2e-71  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0030  triphosphoribosyl-dephospho-CoA synthase MdcB  61.25 
 
 
286 aa  267  2e-70  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0747254  normal 
 
 
-
 
NC_010505  Mrad2831_0351  triphosphoribosyl-dephospho-CoA synthase MdcB  60.61 
 
 
322 aa  251  9.000000000000001e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0398737  normal 
 
 
-
 
NC_009511  Swit_4291  triphosphoribosyl-dephospho-CoA synthase  60.61 
 
 
278 aa  248  1e-64  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6852  triphosphoribosyl-dephospho-CoA synthase MdcB  63.92 
 
 
285 aa  246  3e-64  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0051  triphosphoribosyl-dephospho-CoA synthase MdcB  60.76 
 
 
286 aa  245  4.9999999999999997e-64  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal  0.107341 
 
 
-
 
NC_011666  Msil_3187  triphosphoribosyl-dephospho-CoA synthase MdcB  60.52 
 
 
309 aa  240  2e-62  Methylocella silvestris BL2  Bacteria  n/a    normal  0.632507 
 
 
-
 
NC_007298  Daro_4015  triphosphoribosyl-dephospho-CoA protein  53.33 
 
 
297 aa  218  7.999999999999999e-56  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1848  triphosphoribosyl-dephospho-CoA synthase  47.16 
 
 
318 aa  212  5.999999999999999e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.351206  n/a   
 
 
-
 
NC_008786  Veis_2891  triphosphoribosyl-dephospho-CoA synthase  46.86 
 
 
334 aa  202  7e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0666841  normal  0.0740235 
 
 
-
 
NC_008825  Mpe_A0789  triphosphoribosyl-dephospho-CoA synthase  52.65 
 
 
286 aa  189  4e-47  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.000225089  normal 
 
 
-
 
NC_010524  Lcho_0074  triphosphoribosyl-dephospho-CoA synthase MdcB  49.81 
 
 
295 aa  189  5e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1763  triphosphoribosyl-dephospho-CoA synthase  46.62 
 
 
286 aa  186  4e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1076  triphosphoribosyl-dephospho-CoA synthase MdcB  47.33 
 
 
285 aa  174  9.999999999999999e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1141  ATP:dephospho-CoA triphosphoribosyl transferase  35.45 
 
 
295 aa  170  2e-41  Psychrobacter arcticus 273-4  Bacteria  normal  0.0392227  normal  0.36421 
 
 
-
 
NC_012792  Vapar_5369  Triphosphoribosyl-dephospho-CoA synthase  50.38 
 
 
287 aa  169  5e-41  Variovorax paradoxus S110  Bacteria  normal  0.193045  n/a   
 
 
-
 
NC_011899  Hore_04700  Triphosphoribosyl-dephospho-CoA synthase  33.69 
 
 
467 aa  164  1.0000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2215  triphosphoribosyl-dephospho-CoA synthase CitG  43.56 
 
 
297 aa  164  2.0000000000000002e-39  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2317  triphosphoribosyl-dephospho-CoA synthase CitG  40.67 
 
 
302 aa  161  1e-38  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4592  triphosphoribosyl-dephospho-CoA synthase  41.91 
 
 
315 aa  159  4e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0328  triphosphoribosyl-dephospho-CoA synthase CitG  36.82 
 
 
286 aa  159  6e-38  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2891  triphosphoribosyl-dephospho-CoA synthase  46.61 
 
 
235 aa  155  6e-37  Methylibium petroleiphilum PM1  Bacteria  normal  0.467581  normal 
 
 
-
 
NC_008463  PA14_02560  triphosphoribosyl-dephospho-CoA synthase  41.92 
 
 
293 aa  154  2e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0205763  normal 
 
 
-
 
NC_012560  Avin_10290  triphosphoribosyl-dephospho-CoA synthase  42.29 
 
 
292 aa  154  2e-36  Azotobacter vinelandii DJ  Bacteria  hitchhiker  0.00426102  n/a   
 
 
-
 
NC_008709  Ping_3658  triphosphoribosyl-dephospho-CoA synthase  38.24 
 
 
292 aa  153  2.9999999999999998e-36  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2497  hypothetical protein  33.71 
 
 
280 aa  152  5e-36  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007952  Bxe_B1845  triphosphoribosyl-dephospho-CoA synthase  44.64 
 
 
300 aa  151  1e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0473593 
 
 
-
 
NC_009436  Ent638_3370  triphosphoribosyl-dephospho-CoA synthase  37.11 
 
 
281 aa  151  2e-35  Enterobacter sp. 638  Bacteria  normal  normal  0.0900334 
 
 
-
 
NC_007348  Reut_B4926  triphosphoribosyl-dephospho-CoA synthase  41.49 
 
 
314 aa  149  4e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.82021  n/a   
 
 
-
 
NC_010676  Bphyt_4820  triphosphoribosyl-dephospho-CoA synthase  45.36 
 
 
307 aa  148  9e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0479004  normal  0.0163783 
 
 
-
 
NC_009656  PSPA7_0293  triphosphoribosyl-dephospho-CoA synthase  41.92 
 
 
293 aa  147  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.417783  n/a   
 
 
-
 
NC_012917  PC1_1757  triphosphoribosyl-dephospho-CoA synthase CitG  37.83 
 
 
301 aa  147  2.0000000000000003e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2439  triphosphoribosyl-dephospho-CoA synthase  40.89 
 
 
301 aa  146  3e-34  Pseudomonas putida GB-1  Bacteria  normal  0.045617  normal 
 
 
-
 
NC_007908  Rfer_2405  triphosphoribosyl-dephospho-CoA synthase  39.93 
 
 
302 aa  146  3e-34  Rhodoferax ferrireducens T118  Bacteria  normal  0.146985  n/a   
 
 
-
 
NC_010501  PputW619_2882  triphosphoribosyl-dephospho-CoA synthase  39.86 
 
 
312 aa  145  1e-33  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5086  triphosphoribosyl-dephospho-CoA synthase  42.29 
 
 
316 aa  144  2e-33  Burkholderia phymatum STM815  Bacteria  normal  0.242748  normal  0.0919375 
 
 
-
 
NC_007005  Psyr_0443  triphosphoribosyl-dephospho-CoA synthase  38.35 
 
 
291 aa  142  5e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_1161  triphosphoribosyl-dephospho-CoA synthase  30.82 
 
 
286 aa  142  7e-33  Clostridium perfringens SM101  Bacteria  normal  0.0451951  n/a   
 
 
-
 
NC_004578  PSPTO_5086  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- A synthase  37.28 
 
 
291 aa  140  1.9999999999999998e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1246  triphosphoribosyl-dephospho-CoA synthase MdcB  37.28 
 
 
284 aa  140  1.9999999999999998e-32  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2030  triphosphoribosyl-dephospho-CoA synthase CitG  37.83 
 
 
301 aa  140  3e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3166  triphosphoribosyl-dephospho-CoA synthase  36.47 
 
 
294 aa  137  2e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0068  triphosphoribosyl-dephospho-CoA synthase CitG  35.87 
 
 
302 aa  137  2e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.499675 
 
 
-
 
NC_011080  SNSL254_A0068  triphosphoribosyl-dephospho-CoA synthase CitG  35.87 
 
 
302 aa  137  2e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0069  triphosphoribosyl-dephospho-CoA synthase CitG  35.87 
 
 
302 aa  137  2e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.749123  normal 
 
 
-
 
NC_011083  SeHA_C0067  triphosphoribosyl-dephospho-CoA synthase CitG  35.87 
 
 
302 aa  137  2e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1319  triphosphoribosyl-dephospho-CoA synthase  37.22 
 
 
307 aa  137  3.0000000000000003e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0070  triphosphoribosyl-dephospho-CoA synthase CitG  35.87 
 
 
302 aa  136  3.0000000000000003e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0635  triphosphoribosyl-dephospho-CoA synthase  35.89 
 
 
292 aa  135  7.000000000000001e-31  Escherichia coli E24377A  Bacteria  normal  0.474806  n/a   
 
 
-
 
NC_007492  Pfl01_5301  triphosphoribosyl-dephospho-CoA synthase  40.93 
 
 
290 aa  135  7.000000000000001e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.206727  normal  0.252683 
 
 
-
 
NC_012892  B21_00570  hypothetical protein  36.67 
 
 
292 aa  135  8e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3012  triphosphoribosyl-dephospho-CoA synthase CitG  36.67 
 
 
292 aa  135  8e-31  Escherichia coli DH1  Bacteria  normal  0.139818  n/a   
 
 
-
 
CP001509  ECD_00581  triphosphoribosyl-dephospho-CoA transferase  36.67 
 
 
292 aa  135  8e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3031  triphosphoribosyl-dephospho-CoA synthase  36.67 
 
 
292 aa  135  8e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0664  triphosphoribosyl-dephospho-CoA synthase  36.67 
 
 
292 aa  135  8e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0632  triphosphoribosyl-dephospho-CoA synthase  36.67 
 
 
292 aa  134  9.999999999999999e-31  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0778  triphosphoribosyl-dephospho-CoA synthase  37.55 
 
 
297 aa  132  5e-30  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.843042  normal  0.796929 
 
 
-
 
NC_011353  ECH74115_0701  triphosphoribosyl-dephospho-CoA synthase  36.59 
 
 
290 aa  132  6.999999999999999e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2611  triphosphoribosyl-dephospho-CoA synthase MdcB  38.46 
 
 
285 aa  132  7.999999999999999e-30  Dickeya zeae Ech1591  Bacteria  normal  0.16328  n/a   
 
 
-
 
NC_010658  SbBS512_E0527  triphosphoribosyl-dephospho-CoA synthase  35.19 
 
 
292 aa  130  2.0000000000000002e-29  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0673  triphosphoribosyl-dephospho-CoA synthase  37.55 
 
 
298 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0659  triphosphoribosyl-dephospho-CoA synthase  37.55 
 
 
297 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0732  triphosphoribosyl-dephospho-CoA synthase  37.55 
 
 
297 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0719  triphosphoribosyl-dephospho-CoA synthase  36.8 
 
 
297 aa  129  6e-29  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.647877  normal 
 
 
-
 
NC_010678  Rpic_4940  triphosphoribosyl-dephospho-CoA synthase  39.26 
 
 
309 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0941184 
 
 
-
 
NC_012857  Rpic12D_3864  triphosphoribosyl-dephospho-CoA synthase  39.26 
 
 
309 aa  127  2.0000000000000002e-28  Ralstonia pickettii 12D  Bacteria  normal  0.516158  normal 
 
 
-
 
NC_008781  Pnap_0947  triphosphoribosyl-dephospho-CoA synthase  40.66 
 
 
294 aa  122  7e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.908595  normal 
 
 
-
 
NC_009436  Ent638_3778  triphosphoribosyl-dephospho-CoA synthase  39.75 
 
 
233 aa  120  1.9999999999999998e-26  Enterobacter sp. 638  Bacteria  normal  normal  0.0120548 
 
 
-
 
NC_008528  OEOE_0425  triphosphoribosyl-dephospho-CoA synthase  30.26 
 
 
274 aa  116  5e-25  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0595  Triphosphoribosyl-dephospho-CoA synthase  36.33 
 
 
317 aa  113  3e-24  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3301  triphosphoribosyl-dephospho-CoA synthase  35.19 
 
 
320 aa  112  7.000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.669404 
 
 
-
 
NC_007925  RPC_1054  triphosphoribosyl-dephospho-CoA synthase  38.58 
 
 
300 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0451  triphosphoribosyl-dephospho-CoA protein  32 
 
 
339 aa  96.7  5e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0320145  n/a   
 
 
-
 
NC_011146  Gbem_3856  triphosphoribosyl-dephospho-CoA protein  33.59 
 
 
272 aa  92.4  7e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3941  Triphosphoribosyl-dephospho-CoA synthase  32.8 
 
 
272 aa  83.6  0.000000000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000239715 
 
 
-
 
NC_002939  GSU0806  ATP:dephospho-CoA triphosphoribosyl transferase  32.14 
 
 
273 aa  78.2  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0190  triphosphoribosyl-dephospho-CoA protein  30.8 
 
 
267 aa  76.6  0.0000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0172  triphosphoribosyl-dephospho-CoA protein  30.42 
 
 
267 aa  75.5  0.000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000510729 
 
 
-
 
NC_002967  TDE1523  citXG protein, putative  26.15 
 
 
471 aa  55.1  0.000001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
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