More than 300 homologs were found in PanDaTox collection
for query gene BURPS668_A0190 on replicon NC_009075
Organism: Burkholderia pseudomallei 668



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009075  BURPS668_A0190  transcription regulator  100 
 
 
234 aa  470  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0143  transcription regulator  93.59 
 
 
265 aa  442  1e-123  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3417  two component transcriptional regulator, LuxR family  47.09 
 
 
232 aa  174  9.999999999999999e-43  Ralstonia pickettii 12J  Bacteria  normal  0.901274  normal 
 
 
-
 
NC_012856  Rpic12D_3071  two component transcriptional regulator, LuxR family  46.64 
 
 
232 aa  171  1e-41  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010553  BamMC406_6653  two component LuxR family transcriptional regulator  41.7 
 
 
238 aa  154  1e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  0.879715  hitchhiker  0.00000102566 
 
 
-
 
NC_007973  Rmet_2153  two component LuxR family transcriptional regulator  39.63 
 
 
213 aa  150  2e-35  Cupriavidus metallidurans CH34  Bacteria  normal  0.848776  normal 
 
 
-
 
NC_008390  Bamb_2835  two component LuxR family transcriptional regulator  40.54 
 
 
226 aa  140  9.999999999999999e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.803464  n/a   
 
 
-
 
NC_011071  Smal_0272  two component transcriptional regulator, LuxR family  37.14 
 
 
244 aa  121  9e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.264008  normal  0.348846 
 
 
-
 
NC_003296  RSp1621  capsular synthesis response regulator transcription regulator protein  40.62 
 
 
219 aa  117  9.999999999999999e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.848219 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.44 
 
 
215 aa  108  7.000000000000001e-23  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  34.82 
 
 
226 aa  106  3e-22  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  34.26 
 
 
210 aa  105  7e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  36.27 
 
 
220 aa  103  3e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_008463  PA14_16350  putative two-component response regulator  35.59 
 
 
213 aa  102  5e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1041  transcriptional regulator RcsB  32.76 
 
 
218 aa  101  8e-21  Dickeya dadantii Ech703  Bacteria  normal  0.140172  n/a   
 
 
-
 
CP001637  EcDH1_1441  two component transcriptional regulator, LuxR family  34.25 
 
 
216 aa  101  1e-20  Escherichia coli DH1  Bacteria  hitchhiker  0.0000000259515  n/a   
 
 
-
 
NC_010468  EcolC_1433  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Escherichia coli ATCC 8739  Bacteria  normal  0.0102563  hitchhiker  0.00285537 
 
 
-
 
NC_011094  SeSA_A2496  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.424983  normal 
 
 
-
 
NC_009801  EcE24377A_2517  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000000600529  n/a   
 
 
-
 
NC_009436  Ent638_2797  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Enterobacter sp. 638  Bacteria  hitchhiker  0.000000283918  normal 
 
 
-
 
NC_011083  SeHA_C2510  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.731723  normal  0.0675268 
 
 
-
 
NC_011149  SeAg_B2406  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  decreased coverage  0.00000000625449  n/a   
 
 
-
 
NC_011205  SeD_A2614  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.588596 
 
 
-
 
NC_011353  ECH74115_3357  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000561339  normal 
 
 
-
 
NC_010498  EcSMS35_2366  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000282288  normal 
 
 
-
 
NC_011080  SNSL254_A2455  transcriptional regulator RcsB  34.25 
 
 
216 aa  101  1e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0427332  normal  0.0831575 
 
 
-
 
NC_012917  PC1_2202  two component transcriptional regulator, LuxR family  33.18 
 
 
213 aa  100  1e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  30.94 
 
 
214 aa  100  2e-20  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013421  Pecwa_3209  transcriptional regulator RcsB  33.03 
 
 
216 aa  100  2e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2357  transcriptional regulator RcsB  34.25 
 
 
228 aa  100  2e-20  Escherichia coli HS  Bacteria  hitchhiker  0.00000000398144  n/a   
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  34.58 
 
 
209 aa  100  2e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.51 
 
 
214 aa  100  2e-20  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010658  SbBS512_E0721  transcriptional regulator RcsB  34.25 
 
 
228 aa  100  2e-20  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000245188  n/a   
 
 
-
 
NC_012917  PC1_1107  transcriptional regulator RcsB  33.03 
 
 
216 aa  100  2e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4224  two component LuxR family transcriptional regulator  33.95 
 
 
231 aa  100  3e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.434129 
 
 
-
 
NC_007435  BURPS1710b_A1634  DNA-binding response regulator  32.58 
 
 
230 aa  99.8  3e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  0.723228  n/a   
 
 
-
 
NC_011663  Sbal223_0289  two component transcriptional regulator, LuxR family  30.23 
 
 
212 aa  100  3e-20  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0170  capsular synthesis regulator component B  32.58 
 
 
230 aa  99.8  3e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.443347  n/a   
 
 
-
 
NC_012912  Dd1591_3017  transcriptional regulator RcsB  33.03 
 
 
216 aa  99.4  4e-20  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  30.84 
 
 
217 aa  99  6e-20  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1294  LuxR response regulator receiver  33.33 
 
 
220 aa  98.6  7e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.721447 
 
 
-
 
NC_011071  Smal_0735  two component transcriptional regulator, LuxR family  38.25 
 
 
213 aa  98.6  7e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  30.23 
 
 
213 aa  98.6  7e-20  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  32.59 
 
 
208 aa  98.6  8e-20  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  29.41 
 
 
220 aa  98.2  9e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4229  two component LuxR family transcriptional regulator  31.94 
 
 
215 aa  97.8  1e-19  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00851836  normal 
 
 
-
 
NC_007974  Rmet_4235  two component LuxR family transcriptional regulator  31.94 
 
 
215 aa  98.2  1e-19  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0155  two component transcriptional regulator, LuxR family  34.09 
 
 
212 aa  97.8  1e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  34.23 
 
 
215 aa  97.1  2e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_004347  SO_4444  capsular synthesis regulator component B, putative  28.84 
 
 
212 aa  97.4  2e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010002  Daci_3081  two component LuxR family transcriptional regulator  32.16 
 
 
217 aa  97.1  2e-19  Delftia acidovorans SPH-1  Bacteria  normal  0.450994  normal  0.856151 
 
 
-
 
NC_009832  Spro_3267  transcriptional regulator RcsB  31.65 
 
 
216 aa  97.4  2e-19  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00059602  normal 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  31.56 
 
 
217 aa  97.4  2e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  31.56 
 
 
217 aa  97.4  2e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0081  two component LuxR family transcriptional regulator  33.49 
 
 
196 aa  96.7  3e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4225  two component LuxR family transcriptional regulator  32.61 
 
 
241 aa  96.7  3e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.107538  normal  0.322545 
 
 
-
 
NC_010159  YpAngola_A4132  two-component system response regulator  33.02 
 
 
196 aa  96.3  4e-19  Yersinia pestis Angola  Bacteria  normal  normal  0.249835 
 
 
-
 
NC_009708  YpsIP31758_4080  transcriptional regulatory protein UhpA  33.02 
 
 
196 aa  96.3  4e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1307  transcriptional regulator RcsB  32.11 
 
 
217 aa  95.9  5e-19  Yersinia pestis Angola  Bacteria  normal  0.0162714  normal 
 
 
-
 
NC_010465  YPK_2843  transcriptional regulator RcsB  32.11 
 
 
217 aa  95.9  5e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2764  transcriptional regulator RcsB  32.11 
 
 
217 aa  95.9  5e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.408225  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  33.93 
 
 
213 aa  95.9  5e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  33.04 
 
 
218 aa  95.5  6e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal 
 
 
-
 
NC_009831  Ssed_2455  response regulator  30.41 
 
 
214 aa  95.1  7e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.140183  normal  0.431169 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  31.25 
 
 
223 aa  95.5  7e-19  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal 
 
 
-
 
NC_009997  Sbal195_2677  response regulator  30.41 
 
 
214 aa  95.1  7e-19  Shewanella baltica OS195  Bacteria  normal  0.0738952  normal  0.957867 
 
 
-
 
NC_011663  Sbal223_1782  response regulator  30.41 
 
 
214 aa  95.1  7e-19  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_009665  Shew185_2600  response regulator  30.41 
 
 
214 aa  95.1  7e-19  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_009052  Sbal_2562  response regulator  30.41 
 
 
214 aa  95.1  7e-19  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  32.88 
 
 
201 aa  94.7  9e-19  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  32.59 
 
 
209 aa  95.1  9e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  30.37 
 
 
210 aa  95.1  9e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  33.8 
 
 
211 aa  94.7  1e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  31.7 
 
 
234 aa  94.4  1e-18  Opitutus terrae PB90-1  Bacteria  normal  normal  0.14113 
 
 
-
 
NC_012912  Dd1591_1895  two component transcriptional regulator, LuxR family  31.94 
 
 
213 aa  94.7  1e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  30.41 
 
 
214 aa  94.4  1e-18  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  30.41 
 
 
214 aa  94.4  1e-18  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_009438  Sputcn32_1639  response regulator  30.41 
 
 
226 aa  94.4  1e-18  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00137195  n/a   
 
 
-
 
NC_009092  Shew_1824  response regulator  30.41 
 
 
229 aa  93.6  2e-18  Shewanella loihica PV-4  Bacteria  normal  0.152948  normal 
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  32.59 
 
 
218 aa  93.6  2e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  30.97 
 
 
218 aa  93.6  2e-18  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3287  two component LuxR family transcriptional regulator  31.96 
 
 
223 aa  94  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.404787 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  32.71 
 
 
217 aa  93.6  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_004347  SO_1860  response regulator  30.41 
 
 
214 aa  94  2e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_4618  LuxR response regulator receiver  33.78 
 
 
209 aa  93.6  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.601025 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  37.12 
 
 
214 aa  94  2e-18  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  35.1 
 
 
223 aa  94  2e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  29.03 
 
 
214 aa  94  2e-18  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
NC_010553  BamMC406_6665  two component LuxR family transcriptional regulator  31.34 
 
 
225 aa  94  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0397086  normal  0.0268041 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  30.23 
 
 
216 aa  93.2  3e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.24 
 
 
222 aa  93.2  3e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009075  BURPS668_A0258  LuxR response regulator receiver  31.22 
 
 
230 aa  93.2  3e-18  Burkholderia pseudomallei 668  Bacteria  normal  0.752946  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  29.91 
 
 
209 aa  92.8  4e-18  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  34.23 
 
 
209 aa  92.8  4e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  29.91 
 
 
209 aa  92.8  4e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  29.91 
 
 
209 aa  92.8  4e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  33.33 
 
 
210 aa  92.8  4e-18  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  31.88 
 
 
220 aa  92.4  5e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.55611 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  30.84 
 
 
221 aa  92.4  5e-18  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  32.88 
 
 
239 aa  92  6e-18  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
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