85 homologs were found in PanDaTox collection
for query gene BMASAVP1_A3112 on replicon NC_008785
Organism: Burkholderia mallei SAVP1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007434  BURPS1710b_0008  phenylacetic acid degradation protein PaaB  100 
 
 
314 aa  243  4e-64  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0391689  n/a   
 
 
-
 
NC_009074  BURPS668_3776  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
113 aa  239  1e-62  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000994087  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3112  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
113 aa  239  1e-62  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000000659242  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0011  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
113 aa  239  1e-62  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000021487  n/a   
 
 
-
 
NC_008836  BMA10229_A1983  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
113 aa  239  1e-62  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0181428  n/a   
 
 
-
 
NC_009080  BMA10247_3536  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
113 aa  239  1e-62  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10948  n/a   
 
 
-
 
NC_009076  BURPS1106A_3837  phenylacetate-CoA oxygenase subunit PaaB  99.12 
 
 
113 aa  238  2.9999999999999997e-62  Burkholderia pseudomallei 1106a  Bacteria  normal  0.317768  n/a   
 
 
-
 
NC_007651  BTH_I3098  phenylacetate-CoA oxygenase subunit PaaB  96.46 
 
 
113 aa  233  9e-61  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00422543  n/a   
 
 
-
 
NC_006348  BMA2574  phenylacetate-CoA oxygenase subunit PaaB  100 
 
 
94 aa  202  2e-51  Burkholderia mallei ATCC 23344  Bacteria  normal  0.229514  n/a   
 
 
-
 
NC_007510  Bcep18194_A3428  phenylacetate-CoA oxygenase subunit PaaB  95.74 
 
 
94 aa  196  7e-50  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000130339  normal 
 
 
-
 
NC_010084  Bmul_0231  phenylacetate-CoA oxygenase subunit PaaB  95.74 
 
 
94 aa  196  7e-50  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.0000157686  hitchhiker  0.00116795 
 
 
-
 
NC_008390  Bamb_0248  phenylacetate-CoA oxygenase subunit PaaB  94.68 
 
 
94 aa  193  6e-49  Burkholderia ambifaria AMMD  Bacteria  normal  0.0206057  n/a   
 
 
-
 
NC_008542  Bcen2424_0329  phenylacetate-CoA oxygenase subunit PaaB  93.62 
 
 
94 aa  192  1e-48  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0933291  n/a   
 
 
-
 
NC_010551  BamMC406_0257  phenylacetate-CoA oxygenase subunit PaaB  93.62 
 
 
94 aa  192  1e-48  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00068602  normal  0.0451775 
 
 
-
 
NC_008060  Bcen_2777  phenylacetate-CoA oxygenase subunit PaaB  93.62 
 
 
94 aa  192  1e-48  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0101093  n/a   
 
 
-
 
NC_010508  Bcenmc03_0309  phenylacetate-CoA oxygenase subunit PaaB  92.55 
 
 
94 aa  192  1e-48  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000344095  hitchhiker  0.00245568 
 
 
-
 
NC_010622  Bphy_2858  phenylacetate-CoA oxygenase subunit PaaB  92.55 
 
 
94 aa  189  8e-48  Burkholderia phymatum STM815  Bacteria  normal  0.721  hitchhiker  0.00361704 
 
 
-
 
NC_010681  Bphyt_3663  phenylacetate-CoA oxygenase subunit PaaB  91.49 
 
 
94 aa  187  4e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0953429  hitchhiker  0.000000240833 
 
 
-
 
NC_007951  Bxe_A0294  phenylacetate-CoA oxygenase subunit PaaB  91.49 
 
 
94 aa  187  4e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_3370  phenylacetate-CoA oxygenase subunit PaaB  81.72 
 
 
95 aa  169  9e-42  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4566  phenylacetate-CoA oxygenase subunit PaaB  80.65 
 
 
95 aa  169  1e-41  Ralstonia pickettii 12J  Bacteria  normal  0.229996  normal  0.565711 
 
 
-
 
NC_012857  Rpic12D_3494  phenylacetate-CoA oxygenase subunit PaaB  80.65 
 
 
95 aa  169  1e-41  Ralstonia pickettii 12D  Bacteria  normal  normal  0.144039 
 
 
-
 
NC_007347  Reut_A3207  phenylacetate-CoA oxygenase subunit PaaB  80.65 
 
 
95 aa  167  4e-41  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1505  phenylacetate-CoA oxygenase subunit PaaB  79.12 
 
 
98 aa  164  4e-40  Thauera sp. MZ1T  Bacteria  normal  0.329955  n/a   
 
 
-
 
NC_007298  Daro_0378  phenylacetate-CoA oxygenase subunit PaaB  78.26 
 
 
97 aa  164  4e-40  Dechloromonas aromatica RCB  Bacteria  normal  0.0130596  hitchhiker  0.00116288 
 
 
-
 
NC_003296  RSp0605  phenylacetate-CoA oxygenase subunit PaaB  77.17 
 
 
95 aa  164  4e-40  Ralstonia solanacearum GMI1000  Bacteria  normal  0.62755  normal 
 
 
-
 
NC_010002  Daci_0811  phenylacetate-CoA oxygenase subunit PaaB  72.16 
 
 
101 aa  156  7e-38  Delftia acidovorans SPH-1  Bacteria  normal  0.323223  normal 
 
 
-
 
NC_008825  Mpe_A0988  phenylacetate-CoA oxygenase subunit PaaB  69.47 
 
 
96 aa  151  2e-36  Methylibium petroleiphilum PM1  Bacteria  normal  0.194328  normal 
 
 
-
 
NC_009485  BBta_2866  phenylacetate-CoA oxygenase subunit PaaB  75.28 
 
 
95 aa  150  8e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0886205  normal  0.281971 
 
 
-
 
NC_012791  Vapar_1234  phenylacetate-CoA oxygenase subunit PaaB  71.28 
 
 
98 aa  150  8e-36  Variovorax paradoxus S110  Bacteria  normal  0.849517  n/a   
 
 
-
 
NC_010524  Lcho_3573  phenylacetate-CoA oxygenase subunit PaaB  70.21 
 
 
100 aa  149  8.999999999999999e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.338904 
 
 
-
 
NC_014230  CA2559_05330  Phenylacetic acid degradation B  73.33 
 
 
96 aa  148  3e-35  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0866504  n/a   
 
 
-
 
NC_008786  Veis_3946  phenylacetate-CoA oxygenase subunit PaaB  68.82 
 
 
140 aa  146  8e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.311434  normal  0.35019 
 
 
-
 
NC_008688  Pden_4809  phenylacetate-CoA oxygenase subunit PaaB  67.02 
 
 
94 aa  145  1.0000000000000001e-34  Paracoccus denitrificans PD1222  Bacteria  normal  0.737806  normal  0.497518 
 
 
-
 
NC_007958  RPD_1825  phenylacetate-CoA oxygenase subunit PaaB  75 
 
 
95 aa  146  1.0000000000000001e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.108595  normal 
 
 
-
 
NC_007778  RPB_3640  phenylacetate-CoA oxygenase subunit PaaB  75 
 
 
95 aa  145  2.0000000000000003e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.492282 
 
 
-
 
NC_009720  Xaut_0897  phenylacetate-CoA oxygenase subunit PaaB  70.79 
 
 
95 aa  144  3e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0754  phenylacetate-CoA oxygenase subunit PaaB  68.09 
 
 
94 aa  144  4.0000000000000006e-34  Sphingomonas wittichii RW1  Bacteria  normal  0.933825  normal  0.424699 
 
 
-
 
NC_009484  Acry_2609  phenylacetate-CoA oxygenase subunit PaaB  71.91 
 
 
95 aa  144  4.0000000000000006e-34  Acidiphilium cryptum JF-5  Bacteria  normal  0.588485  n/a   
 
 
-
 
NC_007925  RPC_0690  phenylacetate-CoA oxygenase subunit PaaB  73.86 
 
 
95 aa  143  7.0000000000000006e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6691  phenylacetate-CoA oxygenase, PaaH subunit  66.67 
 
 
96 aa  143  8.000000000000001e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2490  phenylacetate-CoA oxygenase, PaaH subunit  59.81 
 
 
111 aa  141  2e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000503396  normal  0.0134481 
 
 
-
 
NC_011004  Rpal_4288  phenylacetate-CoA oxygenase subunit PaaB  71.59 
 
 
95 aa  141  3e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0448206  n/a   
 
 
-
 
NC_007964  Nham_0929  phenylacetate-CoA oxygenase subunit PaaB  64.89 
 
 
94 aa  140  6e-33  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3094  phenylacetate-CoA oxygenase subunit PaaB  66.3 
 
 
93 aa  139  1.9999999999999998e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.128136  hitchhiker  0.00067057 
 
 
-
 
NC_008699  Noca_3158  phenylacetate-CoA oxygenase subunit PaaB  65.93 
 
 
93 aa  138  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1745  phenylacetate-CoA oxygenase, PaaH subunit  61.7 
 
 
94 aa  138  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.670947 
 
 
-
 
NC_011894  Mnod_3355  phenylacetate-CoA oxygenase subunit PaaB  60.64 
 
 
94 aa  137  3e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.610468  n/a   
 
 
-
 
NC_002947  PP_3277  phenylacetate-CoA oxygenase subunit PaaB  67.78 
 
 
93 aa  137  3.9999999999999997e-32  Pseudomonas putida KT2440  Bacteria  normal  0.950768  normal 
 
 
-
 
NC_009512  Pput_2482  phenylacetate-CoA oxygenase subunit PaaB  67.78 
 
 
93 aa  137  3.9999999999999997e-32  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2632  phenylacetate-CoA oxygenase subunit PaaB  67.78 
 
 
93 aa  137  3.9999999999999997e-32  Pseudomonas putida W619  Bacteria  normal  0.135351  normal  0.0742322 
 
 
-
 
NC_010322  PputGB1_2619  phenylacetate-CoA oxygenase subunit PaaB  67.78 
 
 
93 aa  137  3.9999999999999997e-32  Pseudomonas putida GB-1  Bacteria  normal  0.613188  normal  0.3997 
 
 
-
 
NC_009620  Smed_4148  phenylacetate-CoA oxygenase subunit PaaB  63.83 
 
 
94 aa  137  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.733819 
 
 
-
 
NC_008578  Acel_1442  phenylacetate-CoA oxygenase subunit PaaB  65.26 
 
 
97 aa  137  4.999999999999999e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  0.968932  normal 
 
 
-
 
NC_013739  Cwoe_2199  phenylacetate-CoA oxygenase, PaaH subunit  65.56 
 
 
97 aa  136  8.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.586204  normal 
 
 
-
 
NC_008043  TM1040_3725  phenylacetate-CoA oxygenase subunit PaaB  60.64 
 
 
94 aa  135  2e-31  Ruegeria sp. TM1040  Bacteria  normal  normal  0.518454 
 
 
-
 
NC_013757  Gobs_1906  phenylacetate-CoA oxygenase, PaaH subunit  60 
 
 
123 aa  135  2e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4072  phenylacetate-CoA oxygenase subunit PaaB  66.29 
 
 
106 aa  135  2e-31  Salinispora tropica CNB-440  Bacteria  normal  0.733773  normal  0.10942 
 
 
-
 
CP001637  EcDH1_2256  phenylacetate-CoA oxygenase, PaaH subunit  64.52 
 
 
95 aa  135  2e-31  Escherichia coli DH1  Bacteria  normal  0.735029  n/a   
 
 
-
 
NC_009801  EcE24377A_1574  phenylacetate-CoA oxygenase subunit PaaB  64.52 
 
 
95 aa  135  2e-31  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4471  phenylacetate-CoA oxygenase subunit PaaB  67.05 
 
 
106 aa  134  3.0000000000000003e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1476  phenylacetate-CoA oxygenase subunit PaaB  63.44 
 
 
95 aa  134  5e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2266  phenylacetate-CoA oxygenase subunit PaaB  63.44 
 
 
95 aa  134  5e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1239  phenylacetate-CoA oxygenase PaaH subunit  68.54 
 
 
93 aa  134  5e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3736  phenylacetate-CoA oxygenase subunit PaaB  61.54 
 
 
93 aa  134  5e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.300256  n/a   
 
 
-
 
NC_013159  Svir_26520  phenylacetate-CoA oxygenase, PaaH subunit  64.89 
 
 
94 aa  133  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.217655  normal  0.197294 
 
 
-
 
NC_009832  Spro_3073  phenylacetate-CoA oxygenase subunit PaaB  63.74 
 
 
96 aa  132  1.9999999999999998e-30  Serratia proteamaculans 568  Bacteria  normal  normal  0.147371 
 
 
-
 
NC_008709  Ping_0651  phenylacetate-CoA oxygenase subunit PaaB  63.44 
 
 
95 aa  132  1.9999999999999998e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_09300  phenylacetate-CoA oxygenase, PaaH subunit  63.33 
 
 
95 aa  131  1.9999999999999998e-30  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009956  Dshi_3819  phenylacetate-CoA oxygenase subunit PaaB  60.44 
 
 
110 aa  128  3e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.375319  normal  0.358605 
 
 
-
 
NC_011894  Mnod_7198  phenylacetate-CoA oxygenase subunit PaaB  73.03 
 
 
95 aa  127  5.0000000000000004e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.409122  n/a   
 
 
-
 
NC_008541  Arth_3217  phenylacetate-CoA oxygenase subunit PaaB  61.86 
 
 
100 aa  127  6e-29  Arthrobacter sp. FB24  Bacteria  normal  0.0423434  n/a   
 
 
-
 
NC_014210  Ndas_2480  phenylacetate-CoA oxygenase, PaaH subunit  62.64 
 
 
105 aa  126  8.000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2963  phenylacetate-CoA oxygenase subunit PaaB  63.33 
 
 
157 aa  122  2e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_20160  phenylacetate-CoA oxygenase subunit PaaB  55.1 
 
 
100 aa  120  6e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0654  phenylacetate-CoA oxygenase subunit PaaB  61.54 
 
 
96 aa  114  5e-25  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0220  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 
100 aa  100  6e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0142042 
 
 
-
 
NC_013501  Rmar_1544  phenylacetate-CoA oxygenase, PaaH subunit  50 
 
 
97 aa  98.2  3e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0788  phenylacetic acid degradation B  39.77 
 
 
122 aa  72.4  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.12801 
 
 
-
 
NC_014212  Mesil_3044  phenylacetic acid degradation B  42.05 
 
 
185 aa  68.9  0.00000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2887  phenylacetic acid degradation B  43.04 
 
 
105 aa  60.8  0.000000005  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_1026  phenylacetic acid degradation B  43.04 
 
 
105 aa  59.3  0.00000002  Natrialba magadii ATCC 43099  Archaea  normal  0.22394  n/a   
 
 
-
 
NC_013946  Mrub_2411  phenylacetic acid degradation B  44.26 
 
 
187 aa  56.2  0.0000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1917  phenylacetic acid degradation B  38.46 
 
 
192 aa  54.7  0.0000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.651042  normal  0.140644 
 
 
-
 
NC_013205  Aaci_0808  phenylacetic acid degradation B  33.33 
 
 
125 aa  51.6  0.000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.316826  n/a   
 
 
-
 
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