More than 300 homologs were found in PanDaTox collection
for query gene BBta_6833 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6833  putative ABC transporter permease protein  100 
 
 
291 aa  579  1e-164  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0644882  normal 
 
 
-
 
NC_010511  M446_2927  binding-protein-dependent transport systems inner membrane component  74.91 
 
 
293 aa  438  9.999999999999999e-123  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3528  binding-protein-dependent transport systems inner membrane component  72.69 
 
 
290 aa  421  1e-117  Polaromonas sp. JS666  Bacteria  decreased coverage  0.00986882  normal  0.167942 
 
 
-
 
NC_012791  Vapar_3686  binding-protein-dependent transport systems inner membrane component  72.66 
 
 
291 aa  413  1e-114  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1242  binding-protein-dependent transport systems inner membrane component  73.95 
 
 
261 aa  408  1e-113  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
310 aa  135  8e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_009620  Smed_4329  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
309 aa  135  9.999999999999999e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0434884 
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
310 aa  132  6e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_008698  Tpen_1618  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
283 aa  125  1e-27  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_014165  Tbis_1885  binding-protein-dependent transporter inner membrane component  31.15 
 
 
317 aa  124  2e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.44963 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
307 aa  115  6e-25  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013131  Caci_3596  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
325 aa  115  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.295531  normal 
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  31.48 
 
 
318 aa  115  1.0000000000000001e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
316 aa  114  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
353 aa  115  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013595  Sros_3340  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
338 aa  113  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.781064  normal  0.179396 
 
 
-
 
NC_009720  Xaut_0501  binding-protein-dependent transport systems inner membrane component  28.11 
 
 
365 aa  113  3e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
312 aa  112  7.000000000000001e-24  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
307 aa  112  8.000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
314 aa  111  1.0000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
324 aa  110  2.0000000000000002e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_007778  RPB_2098  binding-protein-dependent transport systems inner membrane component  27.14 
 
 
317 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.529199  hitchhiker  0.000478367 
 
 
-
 
NC_009485  BBta_3555  putative ABC transporter permease protein  27.14 
 
 
317 aa  111  2.0000000000000002e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.34254  normal 
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  32.03 
 
 
294 aa  109  4.0000000000000004e-23  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0386  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
304 aa  110  4.0000000000000004e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.610758  normal  0.0357706 
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
312 aa  109  6e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2109  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
312 aa  109  6e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.376983 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
296 aa  109  6e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_012669  Bcav_3614  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
287 aa  108  8.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.484603  normal  0.727796 
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
294 aa  108  1e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1414  binding-protein-dependent transport systems inner membrane component  29 
 
 
314 aa  108  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
291 aa  108  1e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
305 aa  108  1e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4266  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
569 aa  108  1e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  30.71 
 
 
314 aa  108  1e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
302 aa  108  1e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  31.67 
 
 
294 aa  108  1e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3321  binding-protein-dependent transport systems inner membrane component  27.14 
 
 
317 aa  107  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5641  normal 
 
 
-
 
NC_013159  Svir_11610  carbohydrate ABC transporter membrane protein  39.58 
 
 
295 aa  107  2e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.798667 
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  27.2 
 
 
312 aa  107  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
304 aa  107  3e-22  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_011898  Ccel_0201  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
294 aa  106  4e-22  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  30 
 
 
291 aa  106  4e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
307 aa  106  5e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_007925  RPC_3645  binding-protein-dependent transport systems inner membrane component  26.5 
 
 
318 aa  106  5e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.415839 
 
 
-
 
NC_011004  Rpal_3959  binding-protein-dependent transport systems inner membrane component  26.07 
 
 
315 aa  106  5e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0116  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
317 aa  106  5e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.156333  normal  0.563407 
 
 
-
 
NC_012848  Rleg_5212  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
312 aa  106  5e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.481723 
 
 
-
 
NC_007760  Adeh_4135  ABC sugar transporter, inner membrane subunit  31.8 
 
 
569 aa  105  6e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
314 aa  105  7e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4288  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
569 aa  105  8e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  31.49 
 
 
312 aa  105  1e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
337 aa  105  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
300 aa  105  1e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5475  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
312 aa  104  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.44322 
 
 
-
 
NC_007778  RPB_2547  binding-protein dependent transport system inner membrane protein  28.03 
 
 
312 aa  103  2e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.194318  normal 
 
 
-
 
NC_011368  Rleg2_5607  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
292 aa  104  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.153616  normal 
 
 
-
 
NC_009380  Strop_0804  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
337 aa  103  2e-21  Salinispora tropica CNB-440  Bacteria  normal  0.606963  normal 
 
 
-
 
NC_007604  Synpcc7942_0949  permease protein of sugar ABC transporter  30.04 
 
 
292 aa  103  3e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  0.688345  normal 
 
 
-
 
NC_007952  Bxe_B0079  ABC sugar transporter, inner membrane subunit  29.63 
 
 
304 aa  103  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  29.29 
 
 
296 aa  103  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  28.93 
 
 
296 aa  103  3e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0702  binding-protein-dependent transport systems inner membrane component  40.66 
 
 
447 aa  103  4e-21  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
320 aa  102  7e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009675  Anae109_1663  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
310 aa  102  7e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0803077  normal 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  32.02 
 
 
311 aa  102  8e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_009636  Smed_2455  binding-protein-dependent transport systems inner membrane component  29.02 
 
 
313 aa  102  8e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
294 aa  102  1e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009487  SaurJH9_0200  binding-protein-dependent transport systems inner membrane component  40.23 
 
 
422 aa  102  1e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.13111  n/a   
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
262 aa  101  1e-20  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_009632  SaurJH1_0206  binding-protein-dependent transport systems inner membrane component  40.23 
 
 
422 aa  102  1e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3121  ABC sugar transporter, inner membrane subunit  26.57 
 
 
317 aa  100  2e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2872  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
321 aa  100  2e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
291 aa  101  2e-20  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
309 aa  101  2e-20  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_013526  Tter_2702  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
303 aa  100  2e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000107193  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
328 aa  101  2e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  27.71 
 
 
306 aa  101  2e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  28.09 
 
 
320 aa  100  4e-20  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0821  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
314 aa  99.4  6e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1370  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
320 aa  99.4  6e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.811069  n/a   
 
 
-
 
NC_009485  BBta_4118  putative permease protein of sugar ABC transporter  26.05 
 
 
312 aa  99.4  6e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.15121  normal  0.31936 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
299 aa  99.4  6e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013745  Htur_4651  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
303 aa  99  7e-20  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0178947  n/a   
 
 
-
 
NC_011366  Rleg2_5851  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
311 aa  99  8e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.421015  normal 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  26.33 
 
 
318 aa  99  9e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
-
 
NC_013174  Jden_0235  binding-protein-dependent transport systems inner membrane component  28.73 
 
 
330 aa  98.6  1e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3315  binding-protein-dependent transport systems inner membrane component  27.5 
 
 
314 aa  98.6  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.453212  n/a   
 
 
-
 
NC_012669  Bcav_3713  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
297 aa  98.2  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.174244 
 
 
-
 
NC_013205  Aaci_2236  binding-protein-dependent transport systems inner membrane component  24.5 
 
 
315 aa  98.2  1e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0696  binding-protein-dependent transport systems inner membrane component  39.08 
 
 
426 aa  97.8  2e-19  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00161324  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
319 aa  97.8  2e-19  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_011145  AnaeK_3229  binding-protein-dependent transport systems inner membrane component  27.5 
 
 
314 aa  98.2  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1512  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
426 aa  97.8  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012854  Rleg_6533  binding-protein-dependent transport systems inner membrane component  30 
 
 
292 aa  97.8  2e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.824779  normal  0.0156091 
 
 
-
 
NC_007958  RPD_2909  binding-protein-dependent transport systems inner membrane component  28.43 
 
 
348 aa  97.4  3e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.120786  normal  0.0549624 
 
 
-
 
NC_010505  Mrad2831_2891  binding-protein-dependent transport systems inner membrane component  26.26 
 
 
318 aa  97.1  3e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400754  normal  0.350094 
 
 
-
 
NC_011899  Hore_04590  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
294 aa  96.7  4e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3143  sugar ABC transporter  35.86 
 
 
290 aa  96.7  4e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.382012  normal 
 
 
-
 
NC_009668  Oant_3896  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
289 aa  96.7  4e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0438989  n/a   
 
 
-
 
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