7 homologs were found in PanDaTox collection
for query gene BBta_5525 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_5525  hypothetical protein  100 
 
 
122 aa  244  2e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.51352  normal 
 
 
-
 
NC_011004  Rpal_0370  hypothetical protein  57.02 
 
 
120 aa  139  9.999999999999999e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.411024  n/a   
 
 
-
 
NC_007406  Nwi_1107  hypothetical protein  52.5 
 
 
121 aa  139  1.9999999999999998e-32  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0647182  normal  0.191454 
 
 
-
 
NC_007964  Nham_1339  hypothetical protein  53.33 
 
 
121 aa  135  1e-31  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0361  hypothetical protein  53.98 
 
 
120 aa  124  6e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.0000590019 
 
 
-
 
NC_007778  RPB_0456  hypothetical protein  52.1 
 
 
120 aa  123  7e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.238365 
 
 
-
 
NC_007925  RPC_2598  hypothetical protein  52.54 
 
 
121 aa  120  4e-27  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0022828  normal  0.0970243 
 
 
-
 
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