More than 300 homologs were found in PanDaTox collection
for query gene BBta_5417 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_5417  putative acyl-CoA dehydrogenase family protein  100 
 
 
373 aa  761    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2613  putative acyl-CoA dehydrogenase family protein  62.57 
 
 
373 aa  428  1e-119  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.346291 
 
 
-
 
NC_007778  RPB_0305  putative acyl-CoA dehydrogenase  52.3 
 
 
376 aa  359  3e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1367 
 
 
-
 
NC_013422  Hneap_2211  acyl-CoA dehydrogenase domain protein  47.13 
 
 
378 aa  320  1.9999999999999998e-86  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2837  putative acyl-CoA dehydrogenase  45.63 
 
 
375 aa  311  7.999999999999999e-84  Methylocella silvestris BL2  Bacteria  n/a    normal  0.926618 
 
 
-
 
NC_013889  TK90_0970  acyl-CoA dehydrogenase domain protein  47.58 
 
 
379 aa  311  7.999999999999999e-84  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.276335 
 
 
-
 
NC_011894  Mnod_1706  putative acyl-CoA dehydrogenase  46.97 
 
 
375 aa  301  1e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.087432  n/a   
 
 
-
 
NC_007947  Mfla_2174  putative acyl-CoA dehydrogenase  43.68 
 
 
382 aa  300  4e-80  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4852  acyl-CoA dehydrogenase-like  42.43 
 
 
395 aa  294  2e-78  Polaromonas sp. JS666  Bacteria  normal  normal  0.150232 
 
 
-
 
NC_010511  M446_4820  putative acyl-CoA dehydrogenase  43.49 
 
 
375 aa  273  3e-72  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.0078002 
 
 
-
 
NC_007520  Tcr_0038  putative acyl-CoA dehydrogenase  39.72 
 
 
360 aa  269  7e-71  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1150  acyl-CoA dehydrogenase-like protein  43.1 
 
 
397 aa  267  2e-70  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.428628 
 
 
-
 
NC_011757  Mchl_1309  acyl-CoA dehydrogenase domain protein  42.39 
 
 
397 aa  257  3e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4667  acyl-CoA dehydrogenase-like protein  43.68 
 
 
396 aa  251  1e-65  Methylobacterium populi BJ001  Bacteria  normal  0.0171462  normal 
 
 
-
 
NC_010172  Mext_3484  acyl-CoA dehydrogenase type 2  44.29 
 
 
358 aa  249  4e-65  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3792  Acyl-CoA dehydrogenase type 2 domain  43.43 
 
 
358 aa  244  1.9999999999999999e-63  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.267616 
 
 
-
 
NC_010725  Mpop_3866  Acyl-CoA dehydrogenase type 2 domain  44.94 
 
 
362 aa  239  4e-62  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0222771 
 
 
-
 
NC_008599  CFF8240_0622  acyl-CoA dehydrogenase  36.52 
 
 
354 aa  214  1.9999999999999998e-54  Campylobacter fetus subsp. fetus 82-40  Bacteria  decreased coverage  0.00205931  n/a   
 
 
-
 
NC_009487  SaurJH9_0160  Acyl-CoA dehydrogenase-like protein  29.89 
 
 
344 aa  172  1e-41  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0165  hypothetical protein  29.89 
 
 
344 aa  172  1e-41  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007595  Synpcc7942_B2627  hypothetical protein  30.82 
 
 
353 aa  139  6e-32  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0414836  normal 
 
 
-
 
NC_007406  Nwi_0459  hypothetical protein  30.21 
 
 
367 aa  123  6e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3928  acyl-CoA dehydrogenase, putative  32.24 
 
 
366 aa  117  1.9999999999999998e-25  Delftia acidovorans SPH-1  Bacteria  normal  0.438549  normal  0.0461862 
 
 
-
 
NC_010322  PputGB1_2274  acyl-CoA dehydrogenase  29.31 
 
 
354 aa  117  3.9999999999999997e-25  Pseudomonas putida GB-1  Bacteria  normal  0.921595  normal  0.572718 
 
 
-
 
NC_008463  PA14_34490  hypothetical protein  31.12 
 
 
355 aa  116  6e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000897326  normal  0.153318 
 
 
-
 
NC_009656  PSPA7_2929  hypothetical protein  31.8 
 
 
355 aa  115  1.0000000000000001e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_009512  Pput_2095  Acyl-CoA dehydrogenase-like protein  29.31 
 
 
354 aa  111  2.0000000000000002e-23  Pseudomonas putida F1  Bacteria  normal  normal  0.528653 
 
 
-
 
NC_002947  PP_3638  acyl-CoA dehydrogenase, putative  29.39 
 
 
354 aa  110  4.0000000000000004e-23  Pseudomonas putida KT2440  Bacteria  normal  0.0587866  normal  0.442088 
 
 
-
 
NC_007952  Bxe_B1538  putative acyl-CoA dehydrogenase  30.42 
 
 
367 aa  105  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6334  putative acyl-CoA dehydrogenase  27.92 
 
 
371 aa  103  7e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6511  hypothetical protein  27.64 
 
 
371 aa  101  3e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6745  hypothetical protein  27.64 
 
 
371 aa  101  3e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.839762  normal  0.367272 
 
 
-
 
NC_007953  Bxe_C0102  putative acyl-CoA dehydrogenase  29.41 
 
 
367 aa  97.8  3e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.988493  normal 
 
 
-
 
NC_008532  STER_0700  acyl-CoA dehydrogenase family protein  26.33 
 
 
354 aa  96.3  7e-19  Streptococcus thermophilus LMD-9  Bacteria  normal  0.564675  n/a   
 
 
-
 
NC_013510  Tcur_1452  acyl-CoA dehydrogenase  26.88 
 
 
350 aa  89  1e-16  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_007492  Pfl01_3656  isovaleryl-CoA dehydrogenase  26.56 
 
 
387 aa  87  5e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.179163  normal  0.0293073 
 
 
-
 
NC_009656  PSPA7_3274  citronelloyl-CoA dehydrogenase, GnyD  26.29 
 
 
387 aa  84.3  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_38440  citronelloyl-CoA dehydrogenase, GnyD  26.09 
 
 
387 aa  84.7  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.306085 
 
 
-
 
NC_003910  CPS_1603  isovaleryl-CoA dehydrogenase  25.47 
 
 
389 aa  84  0.000000000000004  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5825  putative acyl-CoA dehydrogenase  28.73 
 
 
365 aa  82.8  0.000000000000009  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.803301 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  26.49 
 
 
387 aa  81.6  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_011138  MADE_02412  isovaleryl-CoA dehydrogenase  25.82 
 
 
389 aa  82  0.00000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.719746  n/a   
 
 
-
 
NC_009092  Shew_2570  acyl-CoA dehydrogenase domain-containing protein  26.16 
 
 
389 aa  81.3  0.00000000000003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2739  acyl-CoA dehydrogenase, putative  26.36 
 
 
447 aa  80.1  0.00000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2470  isovaleryl-CoA dehydrogenase  26.56 
 
 
387 aa  80.1  0.00000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0293728  normal  0.0125727 
 
 
-
 
NC_010322  PputGB1_3662  acyl-CoA dehydrogenase domain-containing protein  26.49 
 
 
387 aa  80.1  0.00000000000006  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000000131881 
 
 
-
 
NC_008700  Sama_1362  isovaleryl-CoA dehydrogenase  25.27 
 
 
389 aa  80.1  0.00000000000006  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.431847 
 
 
-
 
NC_009049  Rsph17029_1168  acyl-CoA dehydrogenase domain-containing protein  25.61 
 
 
385 aa  77.4  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.437637  normal 
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  26.02 
 
 
424 aa  77  0.0000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_007954  Sden_2245  acyl-CoA dehydrogenase-like protein  25.95 
 
 
389 aa  77.4  0.0000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  26.22 
 
 
387 aa  77.4  0.0000000000004  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_004347  SO_1897  isovaleryl-CoA dehydrogenase  25.68 
 
 
389 aa  75.5  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_2506  isovaleryl-CoA dehydrogenase  25.34 
 
 
385 aa  75.9  0.000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.791052  n/a   
 
 
-
 
NC_009831  Ssed_1458  acyl-CoA dehydrogenase domain-containing protein  26.51 
 
 
389 aa  75.1  0.000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.499178 
 
 
-
 
NC_008321  Shewmr4_2322  isovaleryl-CoA dehydrogenase  25.54 
 
 
389 aa  75.1  0.000000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2394  isovaleryl-CoA dehydrogenase  25.54 
 
 
389 aa  74.7  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_009665  Shew185_2846  acyl-CoA dehydrogenase domain-containing protein  25.68 
 
 
389 aa  75.5  0.000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1672  isovaleryl-CoA dehydrogenase  25.54 
 
 
389 aa  74.7  0.000000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2062  acyl-CoA dehydrogenase domain-containing protein  25.26 
 
 
395 aa  73.6  0.000000000005  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2013  acyl-CoA dehydrogenase domain-containing protein  25.67 
 
 
385 aa  73.6  0.000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.392534  normal 
 
 
-
 
NC_008345  Sfri_2727  isovaleryl-CoA dehydrogenase  25.82 
 
 
389 aa  73.6  0.000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4724  acyl-CoA dehydrogenase domain protein  24.21 
 
 
390 aa  73.2  0.000000000008  Variovorax paradoxus S110  Bacteria  normal  0.514268  n/a   
 
 
-
 
NC_009997  Sbal195_2973  acyl-CoA dehydrogenase domain-containing protein  25.41 
 
 
389 aa  72.8  0.000000000009  Shewanella baltica OS195  Bacteria  normal  0.698816  normal  0.555945 
 
 
-
 
NC_009505  BOV_0017  isovaleryl-CoA dehydrogenase  23.98 
 
 
382 aa  72.8  0.00000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2121  isovaleryl-CoA dehydrogenase  23.91 
 
 
388 aa  72.4  0.00000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.274166  n/a   
 
 
-
 
NC_008228  Patl_2925  isovaleryl-CoA dehydrogenase  24.52 
 
 
389 aa  72.8  0.00000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2033  isovaleryl-CoA dehydrogenase  24.38 
 
 
387 aa  72  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.0666462  normal  0.420206 
 
 
-
 
NC_010506  Swoo_3223  acyl-CoA dehydrogenase domain-containing protein  25.41 
 
 
389 aa  72  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153994 
 
 
-
 
NC_011663  Sbal223_1530  acyl-CoA dehydrogenase domain protein  25.14 
 
 
389 aa  71.6  0.00000000002  Shewanella baltica OS223  Bacteria  normal  0.295941  normal 
 
 
-
 
NC_009901  Spea_2797  acyl-CoA dehydrogenase domain-containing protein  24.93 
 
 
389 aa  70.9  0.00000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2828  acyl-CoA dehydrogenase domain-containing protein  25.14 
 
 
389 aa  71.2  0.00000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0037  acyl-CoA dehydrogenase domain-containing protein  24.25 
 
 
387 aa  70.5  0.00000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.119681  n/a   
 
 
-
 
NC_007969  Pcryo_0344  acyl-CoA dehydrogenase-like  25.35 
 
 
395 aa  70.9  0.00000000004  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4686  acyl-CoA dehydrogenase domain protein  24.59 
 
 
393 aa  70.1  0.00000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0162224  normal 
 
 
-
 
NC_007952  Bxe_B0960  isovaleryl-CoA dehydrogenase  24.59 
 
 
393 aa  69.7  0.00000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.433991  normal  0.388602 
 
 
-
 
NC_004310  BR0020  isovaleryl-CoA dehydrogenase  23.71 
 
 
382 aa  69.7  0.00000000009  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2119  acyl-CoA dehydrogenase domain-containing protein  23.78 
 
 
390 aa  69.3  0.0000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.148025 
 
 
-
 
NC_013457  VEA_000377  isovaleryl-CoA dehydrogenase  22.89 
 
 
389 aa  68.9  0.0000000001  Vibrio sp. Ex25  Bacteria  normal  0.749145  n/a   
 
 
-
 
NC_010512  Bcenmc03_6843  acyl-CoA dehydrogenase domain-containing protein  24.32 
 
 
393 aa  68.6  0.0000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3562  acyl-CoA dehydrogenase domain-containing protein  24.59 
 
 
393 aa  68.2  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.364762 
 
 
-
 
NC_006368  lpp1787  hypothetical protein  24.39 
 
 
389 aa  68.2  0.0000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1788  hypothetical protein  24.12 
 
 
389 aa  67.8  0.0000000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_3466  acyl-CoA dehydrogenase domain-containing protein  24.53 
 
 
393 aa  67.4  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.360992  normal 
 
 
-
 
NC_007298  Daro_0100  isovaleryl-CoA dehydrogenase  25.15 
 
 
390 aa  67.4  0.0000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  23.25 
 
 
394 aa  67.4  0.0000000004  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  22.43 
 
 
380 aa  67  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_1371  butyryl-CoA dehydrogenase  23.22 
 
 
389 aa  67  0.0000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.183303  normal 
 
 
-
 
NC_008825  Mpe_A3360  isovaleryl-CoA dehydrogenase  22.49 
 
 
410 aa  66.6  0.0000000006  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3127  acyl-CoA dehydrogenase-like  24.26 
 
 
393 aa  66.6  0.0000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.105998  n/a   
 
 
-
 
NC_008543  Bcen2424_5240  acyl-CoA dehydrogenase domain-containing protein  24.26 
 
 
393 aa  66.6  0.0000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.288959  normal 
 
 
-
 
NC_010515  Bcenmc03_5032  acyl-CoA dehydrogenase domain-containing protein  24.26 
 
 
393 aa  66.2  0.0000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2188  acyl-CoA dehydrogenase domain-containing protein  24.08 
 
 
390 aa  65.9  0.000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0732  isovaleryl-CoA dehydrogenase  23.61 
 
 
387 aa  66.2  0.000000001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  22.07 
 
 
389 aa  65.1  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05480  acyl-CoA dehydrogenase  23.91 
 
 
389 aa  65.5  0.000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007204  Psyc_0313  isovaleryl-CoA dehydrogenase  25 
 
 
395 aa  65.5  0.000000002  Psychrobacter arcticus 273-4  Bacteria  normal  0.740089  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  22.16 
 
 
380 aa  65.1  0.000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6658  isovaleryl-CoA dehydrogenase  24.18 
 
 
390 aa  65.5  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.53503  normal 
 
 
-
 
NC_012560  Avin_49560  Acyl-CoA dehydrogenase  25 
 
 
393 aa  65.1  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.531636  n/a   
 
 
-
 
NC_008699  Noca_0241  acyl-CoA dehydrogenase domain-containing protein  22.25 
 
 
389 aa  64.7  0.000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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