7 homologs were found in PanDaTox collection
for query gene BBta_4944 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_4944  hypothetical protein  100 
 
 
299 aa  615  1e-175  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.174145  normal 
 
 
-
 
NC_007413  Ava_2864  transcriptional regulator  35.8 
 
 
319 aa  108  1e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_24770  predicted transcriptional regulator with HTH domain protein  30.83 
 
 
387 aa  52  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.307493 
 
 
-
 
NC_012918  GM21_1016  putative transcriptional regulator  27.27 
 
 
396 aa  50.8  0.00002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_2313  putative transcriptional regulator  26.32 
 
 
417 aa  48.9  0.0001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.584099  normal  0.468663 
 
 
-
 
NC_008700  Sama_0985  sensor histidine kinase/response regulator TorS  35.53 
 
 
973 aa  46.2  0.0007  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.374582 
 
 
-
 
NC_012034  Athe_0799  putative transcriptional regulator  31.65 
 
 
374 aa  42.4  0.009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
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