10 homologs were found in PanDaTox collection
for query gene BBta_3016 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_2243  nitrous oxidase accessory protein  69.74 
 
 
455 aa  646    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.685019  normal 
 
 
-
 
NC_007925  RPC_1748  twin-arginine translocation pathway signal  72.35 
 
 
454 aa  637    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.166004 
 
 
-
 
NC_007964  Nham_2646  nitrous oxidase accessory protein  72.81 
 
 
455 aa  644    Nitrobacter hamburgensis X14  Bacteria  normal  0.696953  n/a   
 
 
-
 
NC_009485  BBta_3016  hypothetical protein  100 
 
 
458 aa  897    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.399987 
 
 
-
 
NC_007958  RPD_1920  twin-arginine translocation pathway signal  67.76 
 
 
450 aa  605  9.999999999999999e-173  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.69001 
 
 
-
 
NC_007778  RPB_3544  parallel beta-helix repeat-containing protein  70.66 
 
 
451 aa  601  1.0000000000000001e-171  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.502732  normal  0.506953 
 
 
-
 
NC_011004  Rpal_2030  hypothetical protein  67.98 
 
 
452 aa  603  1.0000000000000001e-171  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.789621  n/a   
 
 
-
 
NC_011369  Rleg2_0795  hypothetical protein  42.34 
 
 
456 aa  308  2.0000000000000002e-82  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.19124 
 
 
-
 
NC_012850  Rleg_0908  hypothetical protein  41.63 
 
 
449 aa  301  1e-80  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0731349  normal  0.235988 
 
 
-
 
NC_012669  Bcav_3444  hypothetical protein  33.71 
 
 
622 aa  43.1  0.01  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.623137 
 
 
-
 
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