10 homologs were found in PanDaTox collection
for query gene BBta_2828 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2828  putative ferredoxin-type membrane protein  100 
 
 
367 aa  744    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2129  FAD-dependent pyridine nucleotide-disulphide oxidoreductase  31.5 
 
 
996 aa  152  8.999999999999999e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0052941 
 
 
-
 
NC_011884  Cyan7425_4914  cyclic nucleotide-binding protein  26.03 
 
 
943 aa  66.6  0.0000000007  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.381908 
 
 
-
 
NC_007604  Synpcc7942_0131  cyclic nucleotide-binding domain-containing protein  25.4 
 
 
941 aa  58.5  0.0000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.222865  normal  0.40749 
 
 
-
 
NC_008312  Tery_2045  signal transduction protein  21.92 
 
 
716 aa  54.7  0.000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.148303 
 
 
-
 
NC_011726  PCC8801_0304  cyclic nucleotide-binding protein  23.16 
 
 
954 aa  54.7  0.000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0304  putative transcriptional regulator, Crp/Fnr family  23.16 
 
 
954 aa  54.7  0.000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0768  putative signal transduction protein with EFhand domain  21.08 
 
 
815 aa  50.4  0.00005  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0739  putative signal transduction protein with EFhand domain  21.08 
 
 
815 aa  50.1  0.00006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2925  putative signal transduction protein with EFhand domain  20.63 
 
 
802 aa  47.8  0.0003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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