27 homologs were found in PanDaTox collection
for query gene BBta_1175 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_1175  hypothetical protein  100 
 
 		 306 aa  612  9.999999999999999e-175  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.757777 
 
 
-
 
NC_007964  Nham_0666  Zinc finger/thioredoxin putative  52.82 
 
 		 284 aa  286  2.9999999999999996e-76  Nitrobacter hamburgensis X14  Bacteria  normal  0.248868  n/a   
 
 
-
 
NC_007925  RPC_4868  Zinc finger/thioredoxin putative  54.37 
 
 		 306 aa  283  3.0000000000000004e-75  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.186444  normal  0.75995 
 
 
-
 
NC_007406  Nwi_0575  hypothetical protein  50.33 
 
 		 285 aa  280  2e-74  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0833  Zinc finger/thioredoxin putative  52.16 
 
 		 293 aa  274  2.0000000000000002e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0939857  normal  0.925505 
 
 
-
 
NC_007958  RPD_0942  Zinc finger/thioredoxin putative  50.49 
 
 		 293 aa  273  2.0000000000000002e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_5219  MJ0042 family finger-like protein  50.66 
 
 		 298 aa  270  2.9999999999999997e-71  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.61677  n/a   
 
 
-
 
NC_010172  Mext_2862  Zinc finger-domain-containing protein  31.93 
 
 		 273 aa  123  4e-27  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1596  Zinc finger-domain-containing protein  32.09 
 
 		 318 aa  123  4e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.889508 
 
 
-
 
NC_010505  Mrad2831_2979  Zinc finger-domain-containing protein  32.13 
 
 		 255 aa  112  7.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0278166  normal  1 
 
 
-
 
NC_011757  Mchl_3088  MJ0042 family finger-like protein  40.48 
 
 		 251 aa  99.8  5e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.148898  normal  1 
 
 
-
 
NC_010725  Mpop_2982  MJ0042 family finger-like protein  42.37 
 
 		 244 aa  98.2  2e-19  Methylobacterium populi BJ001  Bacteria  normal  0.739181  normal  1 
 
 
-
 
NC_010338  Caul_3216  Zinc finger-domain-containing protein  27.05 
 
 		 308 aa  90.5  4e-17  Caulobacter sp. K31  Bacteria  normal  0.639596  normal  0.370858 
 
 
-
 
NC_010511  M446_2196  Zinc finger-domain-containing protein  39.83 
 
 		 236 aa  82.8  0.000000000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.676163  normal  0.693925 
 
 
-
 
NC_011894  Mnod_1155  MJ0042 family finger-like protein  41.03 
 
 		 237 aa  81.6  0.00000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.967228  n/a   
 
 
-
 
NC_008347  Mmar10_2373  Zinc finger-domain-containing protein  31.5 
 
 		 297 aa  79.7  0.00000000000006  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.202349 
 
 
-
 
NC_013173  Dbac_1855  MJ0042 family finger-like protein  38.89 
 
 		 383 aa  52.8  0.000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_4144  Zinc finger-domain-containing protein  40.28 
 
 		 1124 aa  52.8  0.000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  hitchhiker  0.000494225 
 
 
-
 
NC_009675  Anae109_2015  Zinc finger-domain-containing protein  31.36 
 
 		 538 aa  50.8  0.00003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_0453  MJ0042 family finger-like protein  40 
 
 		 1144 aa  50.8  0.00003  Anaeromyxobacter sp. K  Bacteria  normal  0.13216  n/a   
 
 
-
 
NC_011891  A2cp1_0454  MJ0042 family finger-like protein  40 
 
 		 1163 aa  50.8  0.00003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.75357  n/a   
 
 
-
 
NC_007794  Saro_0702  Zinc finger/thioredoxin putative  41.43 
 
 		 294 aa  50.4  0.00004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3253  hypothetical protein  42.86 
 
 		 361 aa  46.6  0.0006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.2134  n/a   
 
 
-
 
NC_011145  AnaeK_2048  MJ0042 family finger-like protein  45.24 
 
 		 532 aa  45.4  0.001  Anaeromyxobacter sp. K  Bacteria  normal  0.121287  n/a   
 
 
-
 
NC_011891  A2cp1_2118  MJ0042 family finger-like protein  45.24 
 
 		 530 aa  45.4  0.001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.000277169  n/a   
 
 
-
 
NC_007760  Adeh_0425  zinc finger/thioredoxin putative  43.9 
 
 		 1139 aa  44.7  0.002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2386  Zinc finger-domain-containing protein  27.45 
 
 		 368 aa  42.4  0.01  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.814986  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>