4 homologs were found in PanDaTox collection
for query gene Avin_65020 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_65020  PrrB_RsmZ sRNA family; predicted by Infernal  100 
 
 
165 bp  327  5e-88  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.0000604533  n/a   
 
 
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NC_012560  Avin_65030  PrrB_RsmZ sRNA family; predicted by Infernal  89.25 
 
 
163 bp  105  4e-21  Azotobacter vinelandii DJ  Bacteria  normal  0.0268737  n/a   
 
 
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NC_012560  Avin_65110  PrrB_RsmZ sRNA family; predicted by Infernal  84.85 
 
 
165 bp  77.8  0.0000000000008  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_65010  PrrB_RsmZ sRNA family; predicted by Infernal  84.62 
 
 
165 bp  52  0.00005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
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