54 homologs were found in PanDaTox collection
for query gene Avin_13720 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012560  Avin_13720  Positive regulator for alginate biosynthesis MucC  100 
 
 		 156 aa  308  2e-83  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_54400  positive regulator for alginate biosynthesis MucC  50.35 
 
 		 151 aa  126  1.0000000000000001e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.675062  normal  1 
 
 
-
 
NC_009656  PSPA7_4754  positive regulator for alginate biosynthesis MucC  48.25 
 
 		 151 aa  122  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1470  positive regulator of sigma E, RseC/MucC  51.75 
 
 		 151 aa  108  2.0000000000000002e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.51254  normal  1 
 
 
-
 
NC_011901  Tgr7_1086  positive regulator of sigma E, RseC/MucC  37.24 
 
 		 157 aa  90.9  7e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.284991  n/a   
 
 
-
 
NC_009654  Mmwyl1_1101  positive regulator of sigma E, RseC/MucC  38.03 
 
 		 155 aa  87.4  7e-17  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.138854 
 
 
-
 
NC_008340  Mlg_1342  positive regulator of sigma E, RseC/MucC  33.33 
 
 		 147 aa  70.1  0.00000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0666262  normal  0.770202 
 
 
-
 
NC_008740  Maqu_2260  positive regulator of sigma E, RseC/MucC  33.9 
 
 		 149 aa  67.4  0.00000000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.32117  n/a   
 
 
-
 
NC_011080  SNSL254_A2847  SoxR reducing system protein RseC  34.93 
 
 		 159 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.156123 
 
 
-
 
NC_011083  SeHA_C2851  SoxR reducing system protein RseC  35.62 
 
 		 159 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.74612 
 
 
-
 
NC_007520  Tcr_0730  positive regulator of sigma(E), RseC/MucC  26.95 
 
 		 167 aa  66.2  0.0000000001  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.0000000000000950135  n/a   
 
 
-
 
NC_011094  SeSA_A2829  SoxR reducing system protein RseC  35.62 
 
 		 159 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A2963  SoxR reducing system protein RseC  35.62 
 
 		 159 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.901953  normal  1 
 
 
-
 
NC_011149  SeAg_B2747  SoxR reducing system protein RseC  35.62 
 
 		 159 aa  66.6  0.0000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0281103  n/a   
 
 
-
 
NC_009832  Spro_3673  SoxR reducing system protein RseC  31.91 
 
 		 157 aa  63.9  0.0000000007  Serratia proteamaculans 568  Bacteria  normal  0.290268  normal  0.795656 
 
 
-
 
NC_008309  HS_1608  positive sigma-E factor regulatory protein  25.87 
 
 		 167 aa  61.2  0.000000005  Haemophilus somnus 129PT  Bacteria  normal  0.0389331  n/a   
 
 
-
 
NC_007912  Sde_2248  positive regulator for alginate biosynthesis MucC  27.94 
 
 		 156 aa  60.8  0.000000007  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00000124681  normal  0.0231164 
 
 
-
 
NC_009901  Spea_1034  positive regulator of sigma E, RseC/MucC  27.63 
 
 		 154 aa  59.7  0.00000002  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00221159  n/a   
 
 
-
 
NC_011138  MADE_03001  sigma-E factor regulatory protein RseC  30.61 
 
 		 148 aa  58.2  0.00000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0118803  n/a   
 
 
-
 
NC_010498  EcSMS35_2723  SoxR reducing system protein RseC  31.72 
 
 		 159 aa  58.2  0.00000005  Escherichia coli SMS-3-5  Bacteria  normal  0.149775  normal  1 
 
 
-
 
NC_010468  EcolC_1107  SoxR reducing system protein RseC  30.34 
 
 		 159 aa  56.6  0.0000001  Escherichia coli ATCC 8739  Bacteria  normal  0.288168  normal  1 
 
 
-
 
NC_009800  EcHS_A2725  SoxR reducing system protein RseC  30.34 
 
 		 159 aa  56.6  0.0000001  Escherichia coli HS  Bacteria  normal  0.334856  n/a   
 
 
-
 
CP001637  EcDH1_1098  positive regulator of sigma E, RseC/MucC  30.34 
 
 		 159 aa  56.6  0.0000001  Escherichia coli DH1  Bacteria  decreased coverage  0.00219404  n/a   
 
 
-
 
NC_010658  SbBS512_E2935  SoxR reducing system protein RseC  30.34 
 
 		 159 aa  56.2  0.0000002  Shigella boydii CDC 3083-94  Bacteria  normal  0.151183  n/a   
 
 
-
 
NC_013889  TK90_1953  positive regulator of sigma E, RseC/MucC  37.69 
 
 		 151 aa  55.8  0.0000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.13883  normal  1 
 
 
-
 
NC_011353  ECH74115_3807  SoxR reducing system protein RseC  30.34 
 
 		 159 aa  56.2  0.0000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0524065  normal  1 
 
 
-
 
NC_012892  B21_02428  hypothetical protein  30.34 
 
 		 159 aa  56.2  0.0000002  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_02464  RseC protein involved in reduction of the SoxR iron-sulfur cluster  30.34 
 
 		 159 aa  56.2  0.0000002  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_2856  SoxR reducing system protein RseC  30.34 
 
 		 159 aa  56.2  0.0000002  Escherichia coli E24377A  Bacteria  normal  0.0186933  n/a   
 
 
-
 
NC_007954  Sden_2769  positive regulator of sigma(E), RseC/MucC  29.41 
 
 		 177 aa  54.7  0.0000005  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000517336  n/a   
 
 
-
 
NC_009708  YpsIP31758_1132  SoxR reducing system protein RseC  26.95 
 
 		 151 aa  54.7  0.0000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0219505  n/a   
 
 
-
 
NC_010465  YPK_1185  SoxR reducing system protein RseC  26.95 
 
 		 151 aa  54.7  0.0000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.101352  n/a   
 
 
-
 
NC_010159  YpAngola_A3607  SoxR reducing system protein RseC  26.95 
 
 		 151 aa  54.7  0.0000005  Yersinia pestis Angola  Bacteria  hitchhiker  0.00898672  normal  1 
 
 
-
 
NC_004347  SO_1345  sigma-E factor regulatory protein RseC  28.48 
 
 		 157 aa  53.1  0.000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_2932  positive regulator of sigma E, RseC/MucC  28.69 
 
 		 168 aa  53.1  0.000001  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00401591  n/a   
 
 
-
 
NC_009436  Ent638_3057  SoxR reducing system protein RseC  34.04 
 
 		 158 aa  53.1  0.000002  Enterobacter sp. 638  Bacteria  normal  0.0908162  hitchhiker  0.000179243 
 
 
-
 
NC_003910  CPS_4126  sigma-E factor regulatory protein RseC  26.75 
 
 		 159 aa  52  0.000003  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1275  positive regulator of sigma E, RseC/MucC  28.29 
 
 		 157 aa  50.8  0.000007  Shewanella baltica OS195  Bacteria  normal  0.0820222  normal  1 
 
 
-
 
NC_009831  Ssed_1145  positive regulator of sigma E, RseC/MucC  26.67 
 
 		 151 aa  50.8  0.000007  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000000688126  normal  1 
 
 
-
 
NC_009665  Shew185_1242  positive regulator of sigma E, RseC/MucC  28.29 
 
 		 157 aa  50.8  0.000007  Shewanella baltica OS185  Bacteria  hitchhiker  0.000737615  n/a   
 
 
-
 
NC_011663  Sbal223_3115  positive regulator of sigma E, RseC/MucC  28.29 
 
 		 157 aa  50.8  0.000007  Shewanella baltica OS223  Bacteria  normal  0.0121324  normal  0.0261972 
 
 
-
 
NC_009052  Sbal_1198  positive regulator of sigma E, RseC/MucC  28.29 
 
 		 157 aa  50.4  0.000008  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000634638  n/a   
 
 
-
 
NC_012880  Dd703_2788  SoxR reducing system protein RseC  28.28 
 
 		 155 aa  49.3  0.00002  Dickeya dadantii Ech703  Bacteria  hitchhiker  0.00872544  n/a   
 
 
-
 
NC_013421  Pecwa_1201  SoxR reducing system protein RseC  27.4 
 
 		 150 aa  48.9  0.00003  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.0000162902  n/a   
 
 
-
 
NC_002977  MCA1468  sigma factor regulator MucC  32.22 
 
 		 146 aa  48.5  0.00004  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1772  positive regulator of sigma(E), RseC/MucC  27.36 
 
 		 159 aa  48.1  0.00004  Magnetococcus sp. MC-1  Bacteria  unclonable  0.0000000000338989  hitchhiker  0.000593819 
 
 
-
 
NC_012917  PC1_3074  SoxR reducing system protein RseC  30.61 
 
 		 150 aa  48.1  0.00005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.0025103  n/a   
 
 
-
 
NC_007484  Noc_2463  positive regulator of sigma(E), RseC/MucC  29.89 
 
 		 146 aa  47  0.00009  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.939617  n/a   
 
 
-
 
NC_013422  Hneap_0704  positive regulator of sigma E, RseC/MucC  31.03 
 
 		 183 aa  47  0.0001  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1051  positive regulator of sigma E, RseC/MucC  26.75 
 
 		 158 aa  46.2  0.0002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000179706  normal  1 
 
 
-
 
NC_009438  Sputcn32_1156  positive regulator of sigma E, RseC/MucC  28.57 
 
 		 157 aa  45.8  0.0002  Shewanella putrefaciens CN-32  Bacteria  normal  0.0373343  n/a   
 
 
-
 
NC_009943  Dole_2512  positive regulator of sigma E, RseC/MucC  25.66 
 
 		 152 aa  43.5  0.001  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0068  sigma-E factor regulatory protein RseC  23.93 
 
 		 149 aa  41.6  0.004  Psychromonas ingrahamii 37  Bacteria  decreased coverage  0.00000126596  normal  0.71927 
 
 
-
 
NC_010718  Nther_1269  positive regulator of sigma E, RseC/MucC  24.66 
 
 		 151 aa  40.4  0.009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
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