11 homologs were found in PanDaTox collection
for query gene Avi_3713 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_3713  hypothetical protein  100 
 
 		 413 aa  843    Agrobacterium vitis S4  Bacteria  unclonable  0.000844508  n/a   
 
 
-
 
NC_002947  PP_1659  hypothetical protein  25.98 
 
 		 446 aa  68.9  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.828474 
 
 
-
 
NC_009512  Pput_4059  hypothetical protein  25.86 
 
 		 446 aa  68.6  0.0000000002  Pseudomonas putida F1  Bacteria  normal  0.157657  normal  0.695799 
 
 
-
 
NC_007604  Synpcc7942_2387  hypothetical protein  24.87 
 
 		 671 aa  63.9  0.000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.0416918 
 
 
-
 
NC_009052  Sbal_1979  hypothetical protein  25.66 
 
 		 438 aa  63.2  0.000000008  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1994  hypothetical protein  25.66 
 
 		 438 aa  61.2  0.00000004  Shewanella baltica OS185  Bacteria  normal  0.192222  n/a   
 
 
-
 
NC_009997  Sbal195_2042  hypothetical protein  25.4 
 
 		 438 aa  60.5  0.00000005  Shewanella baltica OS195  Bacteria  normal  0.0909871  normal  0.0827276 
 
 
-
 
NC_011663  Sbal223_2345  hypothetical protein  25.4 
 
 		 438 aa  60.1  0.00000006  Shewanella baltica OS223  Bacteria  normal  1  normal  0.403479 
 
 
-
 
NC_010501  PputW619_3986  hypothetical protein  25.07 
 
 		 446 aa  58.9  0.0000002  Pseudomonas putida W619  Bacteria  normal  0.956854  normal  1 
 
 
-
 
NC_013132  Cpin_1757  putative lipoprotein  29.14 
 
 		 501 aa  54.3  0.000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.866766  normal  1 
 
 
-
 
NC_007954  Sden_2083  hypothetical protein  29.69 
 
 		 580 aa  52.4  0.00001  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
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