6 homologs were found in PanDaTox collection
for query gene Avi_3386 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_3386  beta-ketoacyl synthase domain-containing protein  100 
 
 
351 aa  714    Agrobacterium vitis S4  Bacteria  normal  0.147176  n/a   
 
 
-
 
NC_002939  GSU3168  3-oxoacyl-(acyl carrier protein) synthase  30.77 
 
 
397 aa  54.7  0.000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0539  3-oxoacyl-(acyl carrier protein) synthase  26.64 
 
 
343 aa  53.9  0.000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0287  3-oxoacyl-(acyl carrier protein) synthase  28.37 
 
 
378 aa  47  0.0005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2335  3-oxoacyl-(acyl carrier protein) synthase  25 
 
 
345 aa  46.6  0.0006  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00405525  normal  0.0104415 
 
 
-
 
NC_010524  Lcho_4077  hypothetical protein  26.83 
 
 
395 aa  45.8  0.001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000344983 
 
 
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