8 homologs were found in PanDaTox collection
for query gene Avi_2750 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_2750  hypothetical protein  100 
 
 
615 aa  1273    Agrobacterium vitis S4  Bacteria  normal  0.403758  n/a   
 
 
-
 
NC_008009  Acid345_0287  polysaccharide deacetylase  25.39 
 
 
871 aa  67.8  0.0000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_4042  polysaccharide deacetylase  25.35 
 
 
890 aa  63.9  0.000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.785227 
 
 
-
 
NC_010717  PXO_03488  polysaccharide deacetylase  26.85 
 
 
898 aa  58.9  0.0000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2378  peptidase C14 caspase catalytic subunit p20  37.14 
 
 
658 aa  51.2  0.00005  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010577  XfasM23_2223  polysaccharide deacetylase  34.12 
 
 
900 aa  50.8  0.00006  Xylella fastidiosa M23  Bacteria  normal  0.161248  n/a   
 
 
-
 
NC_010513  Xfasm12_2313  hypothetical protein  32.94 
 
 
903 aa  48.1  0.0005  Xylella fastidiosa M12  Bacteria  normal  0.88432  n/a   
 
 
-
 
NC_009943  Dole_2005  peptidase C14 caspase catalytic subunit p20  27.98 
 
 
477 aa  47.8  0.0006  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.00000000318218  n/a   
 
 
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