More than 300 homologs were found in PanDaTox collection
for query gene Arth_3716 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_4702  choline/carnitine/betaine transporter  57.07 
 
 
583 aa  637    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.911193  decreased coverage  0.0031512 
 
 
-
 
NC_008541  Arth_3716  choline/carnitine/betaine transporter  100 
 
 
629 aa  1263    Arthrobacter sp. FB24  Bacteria  normal  0.903721  n/a   
 
 
-
 
NC_013093  Amir_0044  choline/carnitine/betaine transporter  56.51 
 
 
610 aa  635    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1765  choline/carnitine/betaine transporter  57.4 
 
 
573 aa  640    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.582743 
 
 
-
 
NC_011886  Achl_3457  choline/carnitine/betaine transporter  87.95 
 
 
694 aa  1023    Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_2105  choline/carnitine/betaine transporter  55.29 
 
 
581 aa  632  1e-180  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3628  choline/carnitine/betaine transporter  55.57 
 
 
581 aa  630  1e-179  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2288  choline/carnitine/betaine transporter  56.23 
 
 
582 aa  630  1e-179  Pseudomonas putida GB-1  Bacteria  normal  normal  0.529795 
 
 
-
 
NC_013757  Gobs_2914  choline/carnitine/betaine transporter  58.85 
 
 
611 aa  628  1e-178  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.34631  n/a   
 
 
-
 
NC_008699  Noca_2609  choline/carnitine/betaine transporter  57.89 
 
 
573 aa  624  1e-177  Nocardioides sp. JS614  Bacteria  normal  0.0501554  n/a