More than 300 homologs were found in PanDaTox collection
for query gene Amuc_1984 on replicon NC_010655
Organism: Akkermansia muciniphila ATCC BAA-835



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010655  Amuc_1984  Methylmalonyl-CoA mutase  100 
 
 
684 aa  1409    Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.611894  normal  0.0597183 
 
 
-
 
NC_009767  Rcas_3871  methylmalonyl-CoA mutase, large subunit  42.23 
 
 
720 aa  522  1e-147  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.949138  normal  0.194963 
 
 
-
 
NC_009523  RoseRS_0544  methylmalonyl-CoA mutase, large subunit  41.37 
 
 
723 aa  516  1.0000000000000001e-145  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1348  methylmalonyl-CoA mutase, large subunit  42.41 
 
 
713 aa  514  1e-144  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000457861  unclonable  0.00000004793 
 
 
-
 
NC_008609  Ppro_1285  methylmalonyl-CoA mutase, large subunit  39.46 
 
 
727 aa  461  9.999999999999999e-129  Pelobacter propionicus DSM 2379  Bacteria  normal  0.238431  n/a   
 
 
-
 
NC_012793  GWCH70_2295  methylmalonyl-CoA mutase, large subunit  37.96 
 
 
681 aa  434  1e-120  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0278  methylmalonyl-CoA mutase, large subunit  36.05 
 
 
682 aa  400  9.999999999999999e-111  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A2480  methylmalonyl-CoA mutase  34.44 
 
 
698 aa  385  1e-105  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3305  methylmalonyl-CoA mutase, large subunit  38.3 
 
 
706 aa  381  1e-104  Opitutus terrae PB90-1  Bacteria  normal  0.457427  normal 
 
 
-
 
NC_010505  Mrad2831_3135  methylmalonyl-CoA mutase  34.74 
 
 
629 aa  292  1e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.227192  normal 
 
 
-
 
NC_002950  PG1656  methylmalonyl-CoA mutase, small subunit  30.89 
 
 
618 aa  290  7e-77  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.50388 
 
 
-
 
NC_013510  Tcur_2506  Methylmalonyl-CoA mutase  30.82 
 
 
614 aa  270  5.9999999999999995e-71  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000082079  n/a   
 
 
-
 
NC_007333  Tfu_2761  methylmalonyl-CoA mutase  30.97 
 
 
630 aa  262  2e-68  Thermobifida fusca YX  Bacteria  normal  0.257221  n/a   
 
 
-
 
NC_007958  RPD_1929  methylmalonyl-CoA mutase  32.12 
 
 
623 aa  261  2e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.102484  normal 
 
 
-
 
NC_013159  Svir_05670  methylmalonyl-CoA mutase, N-terminal domain/subunit  32.42 
 
 
622 aa  262  2e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3023  methylmalonyl-CoA mutase small subunit (MCM-beta)  30.71 
 
 
621 aa  259  2e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.577425 
 
 
-
 
NC_009921  Franean1_1943  methylmalonyl-CoA mutase  29.91 
 
 
653 aa  257  4e-67  Frankia sp. EAN1pec  Bacteria  normal  normal  0.133903 
 
 
-
 
NC_007777  Francci3_3006  methylmalonyl-CoA mutase  32.13 
 
 
660 aa  256  1.0000000000000001e-66  Frankia sp. CcI3  Bacteria  normal  0.84067  normal  0.316965 
 
 
-
 
NC_011757  Mchl_2665  Methylmalonyl-CoA mutase  32.98 
 
 
605 aa  253  9.000000000000001e-66  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2041  Methylmalonyl-CoA mutase  31.48 
 
 
623 aa  253  9.000000000000001e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3536  methylmalonyl-CoA mutase  32.68 
 
 
623 aa  248  3e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0287465  normal  0.381464 
 
 
-
 
NC_010725  Mpop_2345  Methylmalonyl-CoA mutase  32.21 
 
 
605 aa  247  6e-64  Methylobacterium populi BJ001  Bacteria  normal  0.418628  normal 
 
 
-
 
NC_010172  Mext_2388  methylmalonyl-CoA mutase  32.52 
 
 
605 aa  247  6e-64  Methylobacterium extorquens PA1  Bacteria  normal  0.55342  normal 
 
 
-
 
NC_009767  Rcas_3872  methylmalonyl-CoA mutase  29.38 
 
 
740 aa  245  1.9999999999999999e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.231489  normal  0.125312 
 
 
-
 
NC_007925  RPC_1762  methylmalonyl-CoA mutase  30.91 
 
 
621 aa  243  9e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.223035 
 
 
-
 
NC_014211  Ndas_5544  Methylmalonyl-CoA mutase  30.02 
 
 
644 aa  242  2e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.11647  normal 
 
 
-
 
NC_013093  Amir_6419  Methylmalonyl-CoA mutase  31.51 
 
 
593 aa  242  2e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  29 
 
 
706 aa  241  2.9999999999999997e-62  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  29.01 
 
 
722 aa  239  8e-62  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1921  methylmalonyl-CoA mutase  31.69 
 
 
601 aa  238  2e-61  Thermobispora bispora DSM 43833  Bacteria  decreased coverage  0.00796016  normal  0.671948 
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  27.25 
 
 
714 aa  237  4e-61  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4374  Methylmalonyl-CoA mutase  30.36 
 
 
640 aa  237  5.0000000000000005e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  28.7 
 
 
712 aa  236  8e-61  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal 
 
 
-
 
NC_009523  RoseRS_0545  methylmalonyl-CoA mutase  28.82 
 
 
740 aa  236  9e-61  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  28.49 
 
 
709 aa  236  1.0000000000000001e-60  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3075  methylmalonyl-CoA mutase  27.27 
 
 
714 aa  236  1.0000000000000001e-60  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3244  methylmalonyl-CoA mutase  27.27 
 
 
714 aa  236  1.0000000000000001e-60  Escherichia coli E24377A  Bacteria  normal  0.98625  n/a   
 
 
-
 
CP001509  ECD_02748  methylmalonyl-CoA mutase  27.27 
 
 
714 aa  235  2.0000000000000002e-60  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  27.27 
 
 
714 aa  235  2.0000000000000002e-60  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02711  hypothetical protein  27.27 
 
 
714 aa  235  2.0000000000000002e-60  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0793  methylmalonyl-CoA mutase  27.27 
 
 
714 aa  235  2.0000000000000002e-60  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_0776  methylmalonyl-CoA mutase, large subunit  27.27 
 
 
714 aa  234  3e-60  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2236  methylmalonyl-CoA mutase  31.04 
 
 
639 aa  234  3e-60  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2636  methylmalonyl-CoA mutase  32.12 
 
 
629 aa  233  7.000000000000001e-60  Nitrobacter hamburgensis X14  Bacteria  normal  0.668897  n/a   
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  28.02 
 
 
709 aa  233  1e-59  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_012793  GWCH70_2294  methylmalonyl-CoA mutase  27.19 
 
 
731 aa  233  1e-59  Geobacillus sp. WCH70  Bacteria  normal  0.895743  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  28.36 
 
 
709 aa  233  1e-59  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal 
 
 
-
 
NC_011831  Cagg_1349  methylmalonyl-CoA mutase  28.89 
 
 
733 aa  232  2e-59  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0148615  unclonable  0.0000000469192 
 
 
-
 
NC_008687  Pden_3681  methylmalonyl-CoA mutase  28.57 
 
 
714 aa  232  2e-59  Paracoccus denitrificans PD1222  Bacteria  normal  0.542374  normal 
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  28.21 
 
 
709 aa  231  3e-59  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  27.81 
 
 
714 aa  231  3e-59  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  26.76 
 
 
716 aa  231  5e-59  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.17991 
 
 
-
 
NC_013595  Sros_3187  Methylmalonyl-CoA mutase  32.7 
 
 
633 aa  228  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.800977  normal  0.217414 
 
 
-
 
NC_007794  Saro_0811  methylmalonyl-CoA mutase  28.57 
 
 
714 aa  229  2e-58  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.251875  n/a   
 
 
-
 
NC_008576  Mmc1_0388  methylmalonyl-CoA mutase  28.84 
 
 
714 aa  229  2e-58  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0279  methylmalonyl-CoA mutase  26.38 
 
 
731 aa  228  4e-58  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011666  Msil_3785  Methylmalonyl-CoA mutase  29.45 
 
 
621 aa  226  8e-58  Methylocella silvestris BL2  Bacteria  n/a    normal  0.546238 
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  27.3 
 
 
712 aa  225  2e-57  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  27.31 
 
 
722 aa  226  2e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.178476 
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  26.42 
 
 
718 aa  224  4e-57  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0321557 
 
 
-
 
NC_011988  Avi_5687  methylmalonyl-CoA mutase  27.41 
 
 
712 aa  223  7e-57  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1221  methylmalonyl-CoA mutase  28.3 
 
 
715 aa  223  8e-57  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.584735  normal 
 
 
-
 
NC_008825  Mpe_A1014  methylmalonyl-CoA mutase  27.64 
 
 
719 aa  223  9.999999999999999e-57  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.856859 
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  27.04 
 
 
720 aa  222  1.9999999999999999e-56  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_010524  Lcho_2697  methylmalonyl-CoA mutase  27.36 
 
 
720 aa  221  3.9999999999999997e-56  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.20812 
 
 
-
 
NC_007925  RPC_1760  methylmalonyl-CoA mutase  27.08 
 
 
718 aa  221  5e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226069 
 
 
-
 
NC_008786  Veis_3398  methylmalonyl-CoA mutase  26.18 
 
 
731 aa  221  5e-56  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.526303  normal 
 
 
-
 
NC_010581  Bind_2200  methylmalonyl-CoA mutase  30.14 
 
 
624 aa  220  7e-56  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.53913 
 
 
-
 
NC_011894  Mnod_5425  methylmalonyl-CoA mutase  34.51 
 
 
612 aa  219  1e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.559772  n/a   
 
 
-
 
NC_011894  Mnod_4573  methylmalonyl-CoA mutase  27.81 
 
 
720 aa  219  2e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6511  methylmalonyl-CoA mutase  27.64 
 
 
712 aa  218  2.9999999999999998e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6418  methylmalonyl-CoA mutase  28.73 
 
 
729 aa  218  4e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2039  methylmalonyl-CoA mutase  27.1 
 
 
719 aa  217  5e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  26.01 
 
 
713 aa  217  5e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3042  methylmalonyl-CoA mutase  27.81 
 
 
720 aa  216  9.999999999999999e-55  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.057217 
 
 
-
 
NC_010531  Pnec_0932  methylmalonyl-CoA mutase  27.69 
 
 
724 aa  216  9.999999999999999e-55  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3753  methylmalonyl-CoA mutase  26.81 
 
 
738 aa  215  1.9999999999999998e-54  Delftia acidovorans SPH-1  Bacteria  normal  0.801598  normal  0.879758 
 
 
-
 
NC_011662  Tmz1t_3486  methylmalonyl-CoA mutase  26.82 
 
 
721 aa  216  1.9999999999999998e-54  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2805  methylmalonyl-CoA mutase  26.96 
 
 
719 aa  214  2.9999999999999995e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.147831  n/a   
 
 
-
 
NC_013441  Gbro_2419  Methylmalonyl-CoA mutase  30.38 
 
 
652 aa  214  3.9999999999999995e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  0.751014  n/a   
 
 
-
 
NC_007298  Daro_4006  methylmalonyl-CoA mutase  27.01 
 
 
716 aa  214  4.9999999999999996e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  27 
 
 
720 aa  214  4.9999999999999996e-54  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6098  methylmalonyl-CoA mutase  27.49 
 
 
712 aa  213  7.999999999999999e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.23929  normal  0.554736 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  26.74 
 
 
720 aa  213  7.999999999999999e-54  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1657  methylmalonyl-CoA mutase  27.95 
 
 
715 aa  213  1e-53  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.387473 
 
 
-
 
NC_009441  Fjoh_0014  methylmalonyl-CoA mutase  26.73 
 
 
711 aa  213  1e-53  Flavobacterium johnsoniae UW101  Bacteria  normal  0.185174  n/a   
 
 
-
 
NC_009379  Pnuc_0910  methylmalonyl-CoA mutase  27.81 
 
 
739 aa  212  2e-53  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.736612  n/a   
 
 
-
 
NC_007948  Bpro_2161  methylmalonyl-CoA mutase  25.48 
 
 
723 aa  211  3e-53  Polaromonas sp. JS666  Bacteria  normal  0.385791  normal  0.481947 
 
 
-
 
NC_007958  RPD_1927  methylmalonyl-CoA mutase  26.99 
 
 
719 aa  211  5e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.273596  normal  0.727114 
 
 
-
 
NC_010725  Mpop_5337  methylmalonyl-CoA mutase  27.19 
 
 
721 aa  211  5e-53  Methylobacterium populi BJ001  Bacteria  normal  0.759699  normal 
 
 
-
 
NC_009485  BBta_3021  methylmalonyl-CoA mutase  27.1 
 
 
718 aa  210  6e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.954275 
 
 
-
 
NC_010172  Mext_4794  methylmalonyl-CoA mutase  27.19 
 
 
721 aa  209  1e-52  Methylobacterium extorquens PA1  Bacteria  normal  0.134601  normal  0.670991 
 
 
-
 
NC_011757  Mchl_5261  methylmalonyl-CoA mutase  27.19 
 
 
721 aa  209  1e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.145645  normal 
 
 
-
 
NC_013757  Gobs_4373  methylmalonyl-CoA mutase, large subunit  26.21 
 
 
735 aa  209  2e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3538  methylmalonyl-CoA mutase  27.29 
 
 
736 aa  209  2e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.162308  normal  0.256268 
 
 
-
 
NC_008781  Pnap_2383  methylmalonyl-CoA mutase  26.85 
 
 
718 aa  209  2e-52  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_22170  methylmalonyl-CoA mutase  26.46 
 
 
754 aa  209  2e-52  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.366718  normal  0.398515 
 
 
-
 
NC_014230  CA2559_07125  methylmalonyl-CoA mutase  26.64 
 
 
707 aa  208  3e-52  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1736  methylmalonyl-CoA mutase  27.49 
 
 
721 aa  207  4e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2505  methylmalonyl-CoA mutase, large subunit  27.82 
 
 
736 aa  207  6e-52  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000422516  n/a   
 
 
-
 
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