8 homologs were found in PanDaTox collection
for query gene Amuc_1085 on replicon NC_010655
Organism: Akkermansia muciniphila ATCC BAA-835



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010655  Amuc_1085  Carbohydrate-selective porin OprB  100 
 
 		 405 aa  847    Akkermansia muciniphila ATCC BAA-835  Bacteria  unclonable  0.000000116954  decreased coverage  8.02155e-19 
 
 
-
 
NC_011146  Gbem_3661  Carbohydrate-selective porin OprB  27.3 
 
 		 476 aa  94  4e-18  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3271  hypothetical protein  28.91 
 
 		 469 aa  92.8  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.0437682  n/a   
 
 
-
 
NC_012918  GM21_3768  Carbohydrate-selective porin OprB  27.05 
 
 		 476 aa  81.3  0.00000000000003  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010655  Amuc_2127  Carbohydrate-selective porin OprB  23.91 
 
 		 494 aa  74.7  0.000000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.96067  normal  0.997375 
 
 
-
 
NC_009483  Gura_0779  carbohydrate-selective porin OprB  27.27 
 
 		 467 aa  70.9  0.00000000004  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000860096  n/a   
 
 
-
 
NC_008554  Sfum_2751  carbohydrate-selective porin OprB  23.36 
 
 		 446 aa  64.3  0.000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.202947  normal  1 
 
 
-
 
NC_007925  RPC_3629  carbohydrate-selective porin OprB  28.37 
 
 		 444 aa  44.7  0.003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.419401  decreased coverage  0.00176786 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>