More than 300 homologs were found in PanDaTox collection
for query gene Amuc_0666 on replicon NC_010655
Organism: Akkermansia muciniphila ATCC BAA-835



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011726  PCC8801_0217  isopropylmalate isomerase large subunit  65.81 
 
 
468 aa  654    Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0214  isopropylmalate isomerase large subunit  65.81 
 
 
468 aa  654    Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00986239  hitchhiker  0.0021568 
 
 
-
 
NC_010655  Amuc_0666  3-isopropylmalate dehydratase, large subunit  100 
 
 
470 aa  971    Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0849  isopropylmalate isomerase large subunit  65.37 
 
 
467 aa  647    Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.339438 
 
 
-
 
NC_014212  Mesil_1604  3-isopropylmalate dehydratase, large subunit  70.64 
 
 
474 aa  702    Meiothermus silvanus DSM 9946  Bacteria  normal  0.135102  normal  0.0211413 
 
 
-
 
NC_010571  Oter_2680  isopropylmalate isomerase large subunit  68.72 
 
 
472 aa  682    Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1850  3-isopropylmalate dehydratase large subunit  68.09 
 
 
474 aa  685    Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3967  isopropylmalate isomerase large subunit  62.5 
 
 
467 aa  627  1e-179  Anabaena variabilis ATCC 29413  Bacteria  normal  0.177679  normal  0.0198383 
 
 
-
 
NC_007604  Synpcc7942_1898  isopropylmalate isomerase large subunit  64.86 
 
 
468 aa  624  1e-177  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.00568531  normal  0.587637 
 
 
-
 
NC_011884  Cyan7425_1136  isopropylmalate isomerase large subunit  62.5 
 
 
468 aa  613  9.999999999999999e-175  Cyanothece sp. PCC 7425  Bacteria  normal  0.638522  normal 
 
 
-
 
NC_014248  Aazo_5028  3-isopropylmalate dehydratase large subunit  60.99 
 
 
467 aa  609  1e-173  'Nostoc azollae' 0708  Bacteria  normal  0.44739  n/a   
 
 
-
 
NC_014148  Plim_0323  3-isopropylmalate dehydratase, large subunit  62.5 
 
 
468 aa  603  1.0000000000000001e-171  Planctomyces limnophilus DSM 3776  Bacteria  decreased coverage  0.000670591  n/a   
 
 
-
 
NC_008820  P9303_24691  isopropylmalate isomerase large subunit  60.65 
 
 
478 aa  597  1e-169  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009091  P9301_02791  isopropylmalate isomerase large subunit  59.65 
 
 
467 aa  594  1e-168  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.0248029  n/a   
 
 
-
 
NC_007335  PMN2A_1622  isopropylmalate isomerase large subunit  58.06 
 
 
469 aa  589  1e-167  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2088  isopropylmalate isomerase large subunit  61.34 
 
 
472 aa  588  1e-167  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0256  isopropylmalate isomerase large subunit  60.43 
 
 
472 aa  591  1e-167  Synechococcus sp. CC9605  Bacteria  normal  0.809992  normal 
 
 
-
 
NC_008819  NATL1_03341  isopropylmalate isomerase large subunit  57.63 
 
 
469 aa  587  1e-166  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.6876  normal 
 
 
-
 
NC_008817  P9515_02891  isopropylmalate isomerase large subunit  58.37 
 
 
469 aa  585  1e-166  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.81083  n/a   
 
 
-
 
NC_008816  A9601_02781  isopropylmalate isomerase large subunit  58.71 
 
 
468 aa  582  1.0000000000000001e-165  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0258  isopropylmalate isomerase large subunit  58.92 
 
 
469 aa  578  1e-164  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_02821  isopropylmalate isomerase large subunit  56.44 
 
 
471 aa  570  1e-161  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2656  isopropylmalate isomerase large subunit  54.84 
 
 
473 aa  539  9.999999999999999e-153  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013158  Huta_0642  isopropylmalate isomerase large subunit  55.17 
 
 
473 aa  541  9.999999999999999e-153  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013922  Nmag_0901  3-isopropylmalate dehydratase, large subunit  54.53 
 
 
474 aa  532  1e-150  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012029  Hlac_0872  isopropylmalate isomerase large subunit  55.17 
 
 
473 aa  526  1e-148  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013743  Htur_2765  3-isopropylmalate dehydratase, large subunit  53.88 
 
 
473 aa  515  1.0000000000000001e-145  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014158  Tpau_1546  aconitate hydratase domain protein  53.67 
 
 
488 aa  518  1.0000000000000001e-145  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406052  n/a   
 
 
-
 
NC_012793  GWCH70_2591  isopropylmalate isomerase large subunit  54.41 
 
 
471 aa  495  1e-139  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00933091  n/a   
 
 
-
 
NC_013411  GYMC61_0861  isopropylmalate isomerase large subunit  52.8 
 
 
471 aa  492  9.999999999999999e-139  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_2848  3-isopropylmalate dehydratase, large subunit  52.04 
 
 
481 aa  489  1e-137  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3280  isopropylmalate isomerase large subunit  52.26 
 
 
467 aa  488  1e-137  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.215534  normal 
 
 
-
 
NC_007643  Rru_A1189  isopropylmalate isomerase large subunit  51.08 
 
 
472 aa  486  1e-136  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.672672  n/a   
 
 
-
 
NC_011886  Achl_2256  isopropylmalate isomerase large subunit  51.6 
 
 
484 aa  484  1e-135  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000783708 
 
 
-
 
NC_013093  Amir_6006  3-isopropylmalate dehydratase, large subunit  52.47 
 
 
472 aa  480  1e-134  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0519027  n/a   
 
 
-
 
NC_013205  Aaci_2225  3-isopropylmalate dehydratase, large subunit  53.63 
 
 
471 aa  479  1e-134  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.918253  n/a   
 
 
-
 
NC_013441  Gbro_3215  3-isopropylmalate dehydratase, large subunit  51.5 
 
 
477 aa  481  1e-134  Gordonia bronchialis DSM 43247  Bacteria  normal  0.056695  n/a   
 
 
-
 
NC_009338  Mflv_4227  isopropylmalate isomerase large subunit  51.82 
 
 
481 aa  476  1e-133  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.888543 
 
 
-
 
NC_009077  Mjls_1901  isopropylmalate isomerase large subunit  51.82 
 
 
481 aa  477  1e-133  Mycobacterium sp. JLS  Bacteria  normal  normal  0.918864 
 
 
-
 
NC_007404  Tbd_1922  isopropylmalate isomerase large subunit  52.59 
 
 
467 aa  477  1e-133  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0630  3-isopropylmalate dehydratase, large subunit  52.15 
 
 
466 aa  476  1e-133  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2149  isopropylmalate isomerase large subunit  50 
 
 
466 aa  478  1e-133  Acidiphilium cryptum JF-5  Bacteria  normal  0.754808  n/a   
 
 
-
 
NC_008146  Mmcs_1921  isopropylmalate isomerase large subunit  51.94 
 
 
481 aa  478  1e-133  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4707  isopropylmalate isomerase large subunit  51.8 
 
 
479 aa  476  1e-133  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.9984 
 
 
-
 
NC_009523  RoseRS_1961  isopropylmalate isomerase large subunit  51.05 
 
 
474 aa  476  1e-133  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_09060  3-isopropylmalate dehydratase, large subunit  50.53 
 
 
471 aa  476  1e-133  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.918212  normal 
 
 
-
 
NC_012912  Dd1591_0592  3-isopropylmalate dehydratase, large subunit  52.36 
 
 
466 aa  475  1e-133  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2519  isopropylmalate isomerase large subunit  50.75 
 
 
484 aa  477  1e-133  Arthrobacter sp. FB24  Bacteria  normal  0.252815  n/a   
 
 
-
 
NC_009972  Haur_4441  isopropylmalate isomerase large subunit  51.27 
 
 
471 aa  478  1e-133  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1967  isopropylmalate isomerase large subunit  51.94 
 
 
481 aa  478  1e-133  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1358  3-isopropylmalate dehydratase, large subunit  51.18 
 
 
477 aa  472  1e-132  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.849318 
 
 
-
 
NC_009767  Rcas_1549  isopropylmalate isomerase large subunit  51.05 
 
 
472 aa  474  1e-132  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269438  normal  0.14031 
 
 
-
 
NC_012669  Bcav_1573  3-isopropylmalate dehydratase, large subunit  52.38 
 
 
493 aa  474  1e-132  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488131  normal 
 
 
-
 
NC_010338  Caul_0216  isopropylmalate isomerase large subunit  51.8 
 
 
480 aa  473  1e-132  Caulobacter sp. K31  Bacteria  normal  normal  0.146559 
 
 
-
 
NC_011071  Smal_3334  3-isopropylmalate dehydratase, large subunit  52.64 
 
 
472 aa  474  1e-132  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13003  isopropylmalate isomerase large subunit  51.84 
 
 
473 aa  474  1e-132  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2135  isopropylmalate isomerase large subunit  50.75 
 
 
481 aa  473  1e-132  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2316  3-isopropylmalate dehydratase, large subunit  52.6 
 
 
487 aa  472  1e-132  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000114053 
 
 
-
 
NC_012803  Mlut_08740  3-isopropylmalate dehydratase, large subunit  50.42 
 
 
484 aa  469  1.0000000000000001e-131  Micrococcus luteus NCTC 2665  Bacteria  decreased coverage  0.000460564  n/a   
 
 
-
 
NC_013757  Gobs_4053  3-isopropylmalate dehydratase, large subunit  51.63 
 
 
474 aa  470  1.0000000000000001e-131  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0194  3-isopropylmalate dehydratase, large subunit  50.54 
 
 
469 aa  469  1.0000000000000001e-131  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3463  3-isopropylmalate dehydratase, large subunit  52.93 
 
 
465 aa  470  1.0000000000000001e-131  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0762821  n/a   
 
 
-
 
NC_013235  Namu_1478  3-isopropylmalate dehydratase, large subunit  50.53 
 
 
486 aa  470  1.0000000000000001e-131  Nakamurella multipartita DSM 44233  Bacteria  normal  0.333411  normal  0.827202 
 
 
-
 
NC_008255  CHU_3742  isopropylmalate isomerase large subunit  49.57 
 
 
466 aa  468  1.0000000000000001e-131  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3797  isopropylmalate isomerase large subunit  51.72 
 
 
466 aa  469  1.0000000000000001e-131  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1245  isopropylmalate isomerase large subunit  50.11 
 
 
470 aa  465  9.999999999999999e-131  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.923179  n/a   
 
 
-
 
NC_010159  YpAngola_A2938  isopropylmalate isomerase large subunit  51.51 
 
 
476 aa  467  9.999999999999999e-131  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3609  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  465  9.999999999999999e-131  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0185  3-isopropylmalate dehydratase, large subunit  49.47 
 
 
468 aa  466  9.999999999999999e-131  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.08009  normal 
 
 
-
 
NC_013131  Caci_8049  3-isopropylmalate dehydratase, large subunit  51.3 
 
 
468 aa  468  9.999999999999999e-131  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.200463  normal 
 
 
-
 
NC_009708  YpsIP31758_3407  isopropylmalate isomerase large subunit  51.51 
 
 
476 aa  467  9.999999999999999e-131  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009355  OSTLU_28677  predicted protein  51.7 
 
 
722 aa  466  9.999999999999999e-131  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_010465  YPK_3537  isopropylmalate isomerase large subunit  51.51 
 
 
476 aa  467  9.999999999999999e-131  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4548  isopropylmalate isomerase large subunit  49.79 
 
 
466 aa  465  9.999999999999999e-131  Shewanella woodyi ATCC 51908  Bacteria  normal  0.182173  normal  0.0136159 
 
 
-
 
NC_013172  Bfae_18560  3-isopropylmalate dehydratase, large subunit  51.08 
 
 
479 aa  463  1e-129  Brachybacterium faecium DSM 4810  Bacteria  normal  0.242112  n/a   
 
 
-
 
NC_007520  Tcr_0795  isopropylmalate isomerase large subunit  51.91 
 
 
474 aa  464  1e-129  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013412  GYMC61_3567  isopropylmalate isomerase large subunit  50.42 
 
 
477 aa  464  1e-129  Geobacillus sp. Y412MC61  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001658  3-isopropylmalate dehydratase large subunit  51.39 
 
 
466 aa  462  1e-129  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11100  3-isopropylmalate dehydratase, large subunit  51.08 
 
 
479 aa  462  1e-129  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2357  3-isopropylmalate dehydratase, large subunit  51.73 
 
 
517 aa  464  1e-129  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3298  3-isopropylmalate dehydratase, large subunit  50.98 
 
 
471 aa  462  1e-129  Nocardioides sp. JS614  Bacteria  normal  0.405916  n/a   
 
 
-
 
CP001509  ECD_00074  isopropylmalate isomerase large subunit  51.29 
 
 
466 aa  461  9.999999999999999e-129  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3526  3-isopropylmalate dehydratase, large subunit  51.29 
 
 
466 aa  461  9.999999999999999e-129  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0473  isopropylmalate isomerase large subunit  50.64 
 
 
474 aa  461  9.999999999999999e-129  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00815  isopropylmalate isomerase large subunit  51.18 
 
 
466 aa  461  9.999999999999999e-129  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_0764  isopropylmalate isomerase large subunit  50.54 
 
 
470 aa  461  9.999999999999999e-129  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.266094 
 
 
-
 
NC_011080  SNSL254_A0123  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  459  9.999999999999999e-129  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.610682  normal  0.713431 
 
 
-
 
NC_010658  SbBS512_E0066  isopropylmalate isomerase large subunit  51.29 
 
 
466 aa  461  9.999999999999999e-129  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0120  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  459  9.999999999999999e-129  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3585  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  460  9.999999999999999e-129  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000478946 
 
 
-
 
NC_010498  EcSMS35_0077  isopropylmalate isomerase large subunit  51.29 
 
 
466 aa  461  9.999999999999999e-129  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.387894 
 
 
-
 
NC_012892  B21_00073  hypothetical protein  51.29 
 
 
466 aa  461  9.999999999999999e-129  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0127  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  459  9.999999999999999e-129  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0743  isopropylmalate isomerase large subunit  50.43 
 
 
466 aa  459  9.999999999999999e-129  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2916  isopropylmalate isomerase large subunit  50.97 
 
 
470 aa  461  9.999999999999999e-129  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1228  isopropylmalate isomerase large subunit  50.65 
 
 
469 aa  459  9.999999999999999e-129  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0896395 
 
 
-
 
NC_011094  SeSA_A0127  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  459  9.999999999999999e-129  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.03719 
 
 
-
 
NC_011083  SeHA_C0122  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  459  9.999999999999999e-129  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.924094  normal  0.160243 
 
 
-
 
NC_009800  EcHS_A0077  isopropylmalate isomerase large subunit  51.07 
 
 
466 aa  460  9.999999999999999e-129  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1113  isopropylmalate isomerase large subunit  52.06 
 
 
465 aa  461  9.999999999999999e-129  Frankia sp. EAN1pec  Bacteria  normal  0.681996  normal  0.828695 
 
 
-
 
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