15 homologs were found in PanDaTox collection
for query gene Amir_6816 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6816  hypothetical protein  100 
 
 
266 aa  539  9.999999999999999e-153  Actinosynnema mirum DSM 43827  Bacteria  normal  0.701031  n/a   
 
 
-
 
NC_013159  Svir_01430  hypothetical protein  39.77 
 
 
261 aa  175  6e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0268047 
 
 
-
 
NC_013159  Svir_24990  hypothetical protein  34.26 
 
 
254 aa  114  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6866  hypothetical protein  29.96 
 
 
272 aa  99.4  6e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.592244  n/a   
 
 
-
 
NC_013159  Svir_35670  hypothetical protein  28.41 
 
 
263 aa  92.8  5e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.222488  normal 
 
 
-
 
NC_013093  Amir_6218  hypothetical protein  32.17 
 
 
256 aa  88.2  1e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6402  hypothetical protein  29.76 
 
 
268 aa  87.8  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.577893  n/a   
 
 
-
 
NC_013159  Svir_35660  hypothetical protein  28.9 
 
 
275 aa  85.5  8e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.335426  normal 
 
 
-
 
NC_013093  Amir_6899  hypothetical protein  26.95 
 
 
258 aa  75.1  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38140  hypothetical protein  28.96 
 
 
259 aa  73.9  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1531  hypothetical protein  28.68 
 
 
254 aa  63.9  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.460343  n/a   
 
 
-
 
NC_013093  Amir_4520  hypothetical protein  28.46 
 
 
259 aa  62.4  0.000000008  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00166177  n/a   
 
 
-
 
NC_013093  Amir_2190  hypothetical protein  29.22 
 
 
264 aa  60.5  0.00000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_01870  hypothetical protein  26.4 
 
 
262 aa  56.2  0.0000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0151  hypothetical protein  27.08 
 
 
252 aa  48.5  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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