50 homologs were found in PanDaTox collection
for query gene Amir_5635 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_5635  phage tail tape measure protein, TP901 family  100 
 
 		 1371 aa  2670    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1175  phage tail tape measure protein, TP901 family  42.28 
 
 		 1343 aa  216  1.9999999999999998e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1457  TP901 family phage tail tape measure protein  40.53 
 
 		 1409 aa  180  2e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.143459  normal  0.730205 
 
 
-
 
NC_008699  Noca_0550  TP901 family phage tail tape measure protein  33.71 
 
 		 969 aa  167  1.0000000000000001e-39  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0994  phage tail tape measure protein, TP901 family  36.69 
 
 		 1173 aa  145  4e-33  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_009632  SaurJH1_1091  TP901 family phage tail tape measure protein  31.37 
 
 		 2066 aa  138  9e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1070  TP901 family phage tail tape measure protein  31.37 
 
 		 2066 aa  138  9e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.917843  n/a   
 
 
-
 
NC_008576  Mmc1_2034  TP901 family phage tail tape measure protein  32.19 
 
 		 1183 aa  134  2.0000000000000002e-29  Magnetococcus sp. MC-1  Bacteria  normal  0.5433  normal  0.337313 
 
 
-
 
NC_008576  Mmc1_2805  TP901 family phage tail tape measure protein  33.13 
 
 		 1183 aa  133  3e-29  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2882  TP901 family phage tail tape measure protein  30.46 
 
 		 1183 aa  132  6e-29  Magnetococcus sp. MC-1  Bacteria  normal  0.143408  normal  0.327483 
 
 
-
 
NC_010182  BcerKBAB4_5330  TP901 family phage tail tape measure protein  33.33 
 
 		 1127 aa  131  7.000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_4374  phage tail tape measure protein, family, core region  30.12 
 
 		 1549 aa  130  2.0000000000000002e-28  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008576  Mmc1_2733  TP901 family phage tail tape measure protein  31.93 
 
 		 1183 aa  129  3e-28  Magnetococcus sp. MC-1  Bacteria  normal  0.332181  hitchhiker  0.00107852 
 
 
-
 
NC_008265  CPR_C0004  phage tail tape measure protein, TP901 family, core region domain protein  28.96 
 
 		 1178 aa  129  3e-28  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1272  TP901 family phage tail tape measure protein  32.34 
 
 		 1183 aa  129  5e-28  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.0574053 
 
 
-
 
NC_008576  Mmc1_2562  TP901 family phage tail tape measure protein  31.65 
 
 		 1183 aa  127  1e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.881784  normal  0.265945 
 
 
-
 
NC_008576  Mmc1_1338  TP901 family phage tail tape measure protein  31.65 
 
 		 1183 aa  127  1e-27  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.413563 
 
 
-
 
NC_009674  Bcer98_2935  TP901 family phage tail tape measure protein  29.38 
 
 		 975 aa  124  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B2400  phage protein  35.42 
 
 		 1297 aa  120  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_3386  Phage tail tape measure protein TP901, core region  32.41 
 
 		 733 aa  113  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.576804  n/a   
 
 
-
 
NC_009997  Sbal195_2891  TP901 family phage tail tape measure protein  28.21 
 
 		 1216 aa  109  3e-22  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_3026  phage tail tape measure protein, TP901 family  30.57 
 
 		 815 aa  108  5e-22  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.0149182 
 
 
-
 
NC_010498  EcSMS35_4349  TP901 family phage tail tape measure protein  30.29 
 
 		 815 aa  108  5e-22  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.186092 
 
 
-
 
NC_013216  Dtox_4245  phage tail tape measure protein, TP901 family  28.05 
 
 		 1478 aa  99.8  4e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_1375  Phage tail tape measure protein TP901, core region  27.44 
 
 		 877 aa  99.8  4e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A4387  gp24  29.3 
 
 		 813 aa  99.4  5e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.0182 
 
 
-
 
NC_009674  Bcer98_2586  TP901 family phage tail tape measure protein  30.73 
 
 		 1346 aa  91.3  1e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2248  TP901 family phage tail tape measure protein  28.35 
 
 		 914 aa  91.3  1e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.678247  hitchhiker  0.00399711 
 
 
-
 
NC_009436  Ent638_3478  TP901 family phage tail tape measure protein  26.35 
 
 		 809 aa  88.6  7e-16  Enterobacter sp. 638  Bacteria  normal  0.790573  normal  0.139413 
 
 
-
 
NC_010465  YPK_2350  TP901 family phage tail tape measure protein  26.49 
 
 		 971 aa  87.4  0.000000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.5162  n/a   
 
 
-
 
NC_007530  GBAA_4082  prophage LambdaBa02, tape measure protein  25.85 
 
 		 959 aa  87  0.000000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.27862  n/a   
 
 
-
 
NC_011658  BCAH187_A2248  putative prophage LambdaBa02, tape measure protein  26.51 
 
 		 1671 aa  87  0.000000000000002  Bacillus cereus AH187  Bacteria  normal  0.0144482  n/a   
 
 
-
 
NC_005945  BAS3793  prophage LambdaBa02, tape measure protein  25.85 
 
 		 959 aa  87  0.000000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0888  TP901 family phage tail tape measure protein  30.66 
 
 		 757 aa  86.7  0.000000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.322682  n/a   
 
 
-
 
NC_010465  YPK_2303  TP901 family phage tail tape measure protein  26.32 
 
 		 971 aa  82.4  0.00000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.841337  n/a   
 
 
-
 
NC_011988  Avi_6196  phage tail protein  29.49 
 
 		 759 aa  79.7  0.0000000000003  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2632  phage tail tape measure protein, family  28.38 
 
 		 1283 aa  78.6  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_0079  TP901 family phage tail tape measure protein  28.87 
 
 		 987 aa  69.7  0.0000000004  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_0868  phage tail tape measure protein, TP901 family  23.81 
 
 		 981 aa  66.6  0.000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_0849  phage tail tape measure protein, TP901 family  27.72 
 
 		 936 aa  60.1  0.0000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.259729  normal  1 
 
 
-
 
NC_013440  Hoch_0659  phage tail tape measure protein, TP901 family  26.57 
 
 		 936 aa  59.7  0.0000004  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1213  phage tail tape measure protein, TP901 family  28.43 
 
 		 1245 aa  58.9  0.0000007  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.73999 
 
 
-
 
NC_013204  Elen_2636  phage tail tape measure protein, TP901 family  26.2 
 
 		 805 aa  58.2  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  1  hitchhiker  0.0092648 
 
 
-
 
NC_012918  GM21_3658  phage tail tape measure protein, TP901 family  27.69 
 
 		 733 aa  57.4  0.000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013171  Apre_0849  phage tail tape measure protein, TP901 family  26 
 
 		 738 aa  57  0.000002  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.000280434  n/a   
 
 
-
 
NC_013216  Dtox_2149  hypothetical protein  46.03 
 
 		 152 aa  53.9  0.00002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.017177 
 
 
-
 
NC_009801  EcE24377A_0993  hypothetical protein  34.01 
 
 		 361 aa  53.9  0.00002  Escherichia coli E24377A  Bacteria  normal  0.600478  n/a   
 
 
-
 
NC_009801  EcE24377A_0996  hypothetical protein  24.87 
 
 		 459 aa  52.4  0.00005  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1637  SLT domain-containing protein  26.32 
 
 		 1736 aa  52  0.00007  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_1515  TP901 family phage tail tape measure protein  24.46 
 
 		 921 aa  47  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>