25 homologs were found in PanDaTox collection
for query gene Amir_3867 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_3867  putative transcriptional regulator, TetR family  100 
 
 		 219 aa  436  1e-121  Actinosynnema mirum DSM 43827  Bacteria  unclonable  0.00000000371985  n/a   
 
 
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NC_014211  Ndas_4946  transcriptional regulator, TetR family  43.05 
 
 		 192 aa  118  6e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
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NC_009921  Franean1_6683  TetR family transcriptional regulator  30.64 
 
 		 207 aa  66.2  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4496  hypothetical protein  35.22 
 
 		 203 aa  58.2  0.00000009  Ralstonia eutropha JMP134  Bacteria  normal  0.621109  n/a   
 
 
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NC_008699  Noca_0973  regulatory protein, TetR  36.42 
 
 		 208 aa  56.2  0.0000004  Nocardioides sp. JS614  Bacteria  normal  0.995108  n/a   
 
 
-
 
NC_007974  Rmet_5057  TetR family transcriptional regulator  31.69 
 
 		 214 aa  54.3  0.000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.389199  normal  1 
 
 
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NC_009664  Krad_3831  transcriptional regulator, TetR family  31.51 
 
 		 208 aa  52  0.000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.484216  normal  0.0261757 
 
 
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NC_009338  Mflv_0925  TetR family transcriptional regulator  26.75 
 
 		 207 aa  50.4  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_2500  TetR family transcriptional regulator  36.89 
 
 		 234 aa  48.5  0.00007  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2431  transcriptional regulator, TetR family  32.02 
 
 		 198 aa  46.6  0.0003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.324366  normal  1 
 
 
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NC_008322  Shewmr7_2643  TetR family transcriptional regulator  36.47 
 
 		 233 aa  45.4  0.0006  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2576  TetR family transcriptional regulator  36.47 
 
 		 233 aa  45.4  0.0006  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1300  transcriptional regulator, TetR family  26.57 
 
 		 188 aa  44.7  0.001  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.480052 
 
 
-
 
NC_013521  Sked_35350  transcriptional regulator, TetR family  32.08 
 
 		 223 aa  44.3  0.001  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.147408 
 
 
-
 
NC_013174  Jden_2496  transcriptional regulator, TetR family  58.14 
 
 		 226 aa  44.3  0.001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.40575  normal  0.202338 
 
 
-
 
NC_009438  Sputcn32_1419  TetR family transcriptional regulator  33.72 
 
 		 232 aa  43.9  0.002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_011365  Gdia_1470  putative transcriptional regulator, TetR family  27.88 
 
 		 192 aa  43.1  0.003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.596057  normal  0.840694 
 
 
-
 
NC_007794  Saro_1072  TetR family transcriptional regulator  34.94 
 
 		 212 aa  43.1  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0604431  n/a   
 
 
-
 
NC_009052  Sbal_1521  TetR family transcriptional regulator  36.59 
 
 		 233 aa  42.7  0.004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2834  transcriptional regulator, TetR family  36.59 
 
 		 233 aa  42.7  0.004  Shewanella baltica OS223  Bacteria  normal  0.170846  normal  0.770206 
 
 
-
 
NC_009997  Sbal195_1548  TetR family transcriptional regulator  36.59 
 
 		 233 aa  42.7  0.004  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1561  TetR family transcriptional regulator  34.38 
 
 		 214 aa  42.4  0.006  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1508  transcriptional regulator, TetR family  26.4 
 
 		 215 aa  42  0.008  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0994502  normal  0.123569 
 
 
-
 
NC_007510  Bcep18194_A4675  TetR family transcriptional regulator  26.75 
 
 		 273 aa  41.6  0.009  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104564 
 
 
-
 
NC_009665  Shew185_1512  TetR family transcriptional regulator  35.37 
 
 		 233 aa  41.6  0.01  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
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