7 homologs were found in PanDaTox collection
for query gene Amir_2774 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2774  putative integral membrane protein  100 
 
 
242 aa  456  1e-127  Actinosynnema mirum DSM 43827  Bacteria  normal  0.227897  n/a   
 
 
-
 
NC_013093  Amir_2480  putative integral membrane protein  54.77 
 
 
238 aa  191  1e-47  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.000000114797  n/a   
 
 
-
 
NC_009380  Strop_2588  hypothetical protein  35.83 
 
 
256 aa  110  2.0000000000000002e-23  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10094  hypothetical protein  37.04 
 
 
282 aa  105  8e-22  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.77599 
 
 
-
 
NC_009953  Sare_2786  hypothetical protein  35.83 
 
 
256 aa  96.7  3e-19  Salinispora arenicola CNS-205  Bacteria  normal  0.0857143  decreased coverage  0.000150974 
 
 
-
 
NC_013757  Gobs_1274  integral membrane protein  40.7 
 
 
215 aa  76.6  0.0000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5781  hypothetical protein  33.97 
 
 
208 aa  68.6  0.00000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.834779  normal 
 
 
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