7 homologs were found in PanDaTox collection
for query gene Amir_1954 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_1954  LPXTG-motif cell wall anchor domain protein  100 
 
 		 570 aa  1088    Actinosynnema mirum DSM 43827  Bacteria  normal  0.614483  n/a   
 
 
-
 
NC_012669  Bcav_4109  LPXTG-motif cell wall anchor domain protein  31.64 
 
 		 775 aa  102  3e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.593331 
 
 
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NC_009972  Haur_1598  hypothetical protein  29 
 
 		 675 aa  61.2  0.00000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000695683  n/a   
 
 
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NC_013037  Dfer_1747  hypothetical protein  29.67 
 
 		 495 aa  52.4  0.00002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0404  hypothetical protein  29.24 
 
 		 776 aa  52.8  0.00002  Conexibacter woesei DSM 14684  Bacteria  normal  0.321562  normal  0.0935751 
 
 
-
 
NC_009921  Franean1_5164  glycogen debranching enzyme GlgX  29.01 
 
 		 1537 aa  50.1  0.0001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0685376 
 
 
-
 
NC_008699  Noca_0886  hypothetical protein  34.33 
 
 		 827 aa  47  0.0009  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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