57 homologs were found in PanDaTox collection
for query gene Amir_0457 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0457  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components  100 
 
 
333 aa  672    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34350  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component  46.64 
 
 
297 aa  253  3e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1820  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  36.25 
 
 
327 aa  186  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.246405 
 
 
-
 
NC_013093  Amir_5419  NMT1/THI5 like domain protein  31.38 
 
 
345 aa  169  6e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1814  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  32.3 
 
 
322 aa  154  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.641284  normal  0.673988 
 
 
-
 
NC_013159  Svir_34300  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component  30.5 
 
 
319 aa  140  3e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4669  NMT1/THI5 like domain protein  33 
 
 
335 aa  136  6.0000000000000005e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2477  NMT1/THI5 like domain protein  25 
 
 
331 aa  103  3e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2330  NMT1/THI5 like domain-containing protein  25.43 
 
 
314 aa  91.3  2e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5441  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.74 
 
 
329 aa  83.2  0.000000000000006  Mycobacterium sp. KMS  Bacteria  normal  normal  0.558403 
 
 
-
 
NC_008146  Mmcs_5352  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.74 
 
 
329 aa  83.2  0.000000000000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5731  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.74 
 
 
329 aa  82.8  0.000000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7861  hypothetical protein  26.37 
 
 
381 aa  73.9  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.491165  normal 
 
 
-
 
NC_008541  Arth_3083  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  19.8 
 
 
328 aa  64.7  0.000000002  Arthrobacter sp. FB24  Bacteria  normal  0.261971  n/a   
 
 
-
 
NC_014151  Cfla_0288  NMT1/THI5 like domain protein  25.35 
 
 
327 aa  61.2  0.00000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.133462  hitchhiker  0.0000957197 
 
 
-
 
NC_007347  Reut_A1977  ABC transporter, substrate-binding protein, aliphatic sulphonates  26.58 
 
 
351 aa  56.2  0.0000007  Ralstonia eutropha JMP134  Bacteria  normal  0.764481  n/a   
 
 
-
 
NC_012856  Rpic12D_1134  NMT1/THI5 like domain protein  24.83 
 
 
349 aa  53.1  0.000006  Ralstonia pickettii 12D  Bacteria  normal  0.0977895  normal  0.576381 
 
 
-
 
NC_007413  Ava_5012  ABC transporter, substrate-binding protein, aliphatic sulphonates  25.27 
 
 
369 aa  51.2  0.00002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0114898  normal  0.178041 
 
 
-
 
NC_007511  Bcep18194_B2069  ABC transporter, substrate-binding protein, aliphatic sulphonates  27.17 
 
 
330 aa  50.8  0.00003  Burkholderia sp. 383  Bacteria  normal  0.0268336  normal  0.832106 
 
 
-
 
NC_010086  Bmul_4570  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  23.99 
 
 
329 aa  50.8  0.00003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.285376  normal 
 
 
-
 
NC_010515  Bcenmc03_3510  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  23.62 
 
 
330 aa  50.1  0.00005  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00263182 
 
 
-
 
NC_010682  Rpic_1042  NMT1/THI5 like domain protein  24.7 
 
 
349 aa  49.7  0.00006  Ralstonia pickettii 12J  Bacteria  normal  normal  0.778479 
 
 
-
 
NC_008543  Bcen2424_4014  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  23.99 
 
 
330 aa  49.7  0.00007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4352  ABC transporter, substrate-binding protein, aliphatic sulphonates  23.99 
 
 
330 aa  49.7  0.00007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.686834  n/a   
 
 
-
 
NC_009485  BBta_5981  ABC transporter substrate-binding protein  21.7 
 
 
311 aa  49.7  0.00008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.409896 
 
 
-
 
NC_008255  CHU_1969  ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein  24.19 
 
 
457 aa  49.3  0.00009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.733899  normal  0.21711 
 
 
-
 
NC_007644  Moth_0097  NLPA lipoprotein  26.09 
 
 
328 aa  48.1  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4374  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  26.36 
 
 
378 aa  48.1  0.0002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3159  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  24.03 
 
 
346 aa  47.8  0.0003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.338207 
 
 
-
 
NC_007413  Ava_4154  ABC transporter, substrate-binding protein, aliphatic sulphonates  24.15 
 
 
367 aa  47.8  0.0003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0230431  normal  0.542699 
 
 
-
 
NC_010681  Bphyt_1390  NMT1/THI5 like domain protein  24.64 
 
 
346 aa  47.4  0.0004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.530017  hitchhiker  0.00234319 
 
 
-
 
NC_003295  RSc1198  signal peptide protein  24.53 
 
 
349 aa  47  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2172  putative nitrate transporter component, nrtA  22.93 
 
 
460 aa  47  0.0004  Methylobacillus flagellatus KT  Bacteria  normal  0.210639  normal 
 
 
-
 
NC_010622  Bphy_1964  NMT1/THI5-like domain-containing protein  24 
 
 
344 aa  47  0.0004  Burkholderia phymatum STM815  Bacteria  normal  0.0999952  normal 
 
 
-
 
NC_008391  Bamb_3414  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  22.51 
 
 
330 aa  46.6  0.0005  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.361362 
 
 
-
 
NC_010552  BamMC406_3921  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  22.51 
 
 
330 aa  46.6  0.0006  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.00214435  normal  0.666529 
 
 
-
 
NC_011884  Cyan7425_4923  nitrate ABC transporter, ATPase subunits C and D  24.45 
 
 
668 aa  46.6  0.0006  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.502071 
 
 
-
 
NC_013510  Tcur_1035  aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein  25.97 
 
 
349 aa  46.2  0.0007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0465  ABC transporter, substrate-binding protein, aliphatic sulphonates  24.36 
 
 
347 aa  46.6  0.0007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.176308  normal 
 
 
-
 
NC_013526  Tter_2224  aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein  26.29 
 
 
327 aa  46.2  0.0008  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000455762  n/a   
 
 
-
 
NC_009972  Haur_2789  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  24.32 
 
 
330 aa  45.8  0.001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3487  putative nitrate transporter component, nrtA  23.19 
 
 
464 aa  45.4  0.001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1642  putative sulfonate/nitrate transport system substrate-binding protein  26.88 
 
 
335 aa  45.1  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.456194  n/a   
 
 
-
 
NC_011138  MADE_03654  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component  21.87 
 
 
469 aa  44.7  0.002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1166  regulatory protein NasS, putative  27.2 
 
 
353 aa  44.7  0.002  Burkholderia thailandensis E264  Bacteria  normal  0.241228  n/a   
 
 
-
 
NC_012917  PC1_3748  ABC transporter, substrate binding protein  20.76 
 
 
339 aa  44.3  0.003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0365  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.09 
 
 
341 aa  43.5  0.005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.796573  normal 
 
 
-
 
NC_011726  PCC8801_4373  nitrate transport protein, NrtC like protein  23.72 
 
 
461 aa  43.1  0.006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_3147  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  21.41 
 
 
344 aa  43.1  0.006  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008538  Arth_4355  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components  21.77 
 
 
334 aa  43.5  0.006  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.0000418029  n/a   
 
 
-
 
NC_010725  Mpop_4266  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.4 
 
 
341 aa  42.7  0.008  Methylobacterium populi BJ001  Bacteria  normal  0.533819  normal 
 
 
-
 
NC_013161  Cyan8802_4435  nitrate transporter, putative  23.72 
 
 
461 aa  42.7  0.009  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.210676 
 
 
-
 
NC_011666  Msil_0774  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  21.2 
 
 
316 aa  42.7  0.009  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0489455 
 
 
-
 
NC_010655  Amuc_1297  putative substrate-binding protein of aliphatic sulfonate ABC transporter  25 
 
 
357 aa  42.7  0.009  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1672  putative regulatory protein  26.34 
 
 
353 aa  42.7  0.009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1025  nitrate transport ATP-binding subunits C and D  22.65 
 
 
667 aa  42.7  0.009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.129474 
 
 
-
 
NC_007963  Csal_0183  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  27.96 
 
 
345 aa  42.4  0.01  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
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