More than 300 homologs were found in PanDaTox collection
for query gene Amir_0376 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2745  methyl-accepting chemotaxis sensory transducer with GAF sensor  83.46 
 
 
522 aa  821    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0376  methyl-accepting chemotaxis sensory transducer with GAF sensor  100 
 
 
520 aa  1026    Actinosynnema mirum DSM 43827  Bacteria  normal  0.984009  n/a   
 
 
-
 
NC_013521  Sked_05860  methyl-accepting chemotaxis protein  63.87 
 
 
517 aa  612  9.999999999999999e-175  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1930  methyl-accepting chemotaxis sensory transducer  58.38 
 
 
517 aa  582  1.0000000000000001e-165  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0153757  normal 
 
 
-
 
NC_009664  Krad_4465  methyl-accepting chemotaxis sensory transducer  58.48 
 
 
532 aa  577  1.0000000000000001e-163  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.857744  normal  0.045525 
 
 
-
 
NC_013174  Jden_2472  methyl-accepting chemotaxis sensory transducer with GAF sensor  49.8 
 
 
519 aa  440  9.999999999999999e-123  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0704852  normal  0.0411737 
 
 
-
 
NC_009664  Krad_4261  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
525 aa  348  1e-94  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.545392  normal  0.505117 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  48.53 
 
 
965 aa  343  2.9999999999999997e-93  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_013757  Gobs_3394  methyl-accepting chemotaxis sensory transducer with GAF sensor  38.95 
 
 
516 aa  293  4e-78  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  52.33 
 
 
545 aa  164  5.0000000000000005e-39  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  55.48 
 
 
547 aa  163  8.000000000000001e-39  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  49.16 
 
 
904 aa  159  8e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  53.75 
 
 
545 aa  157  3e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  52.07 
 
 
523 aa  154  2.9999999999999998e-36  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  48.69 
 
 
542 aa  154  4e-36  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  49.45 
 
 
532 aa  154  4e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  47.06 
 
 
518 aa  154  5e-36  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  52.94 
 
 
562 aa  153  8.999999999999999e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  51.74 
 
 
533 aa  152  1e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  50 
 
 
542 aa  152  1e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  50 
 
 
538 aa  149  8e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  52.35 
 
 
546 aa  149  1.0000000000000001e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  51.76 
 
 
537 aa  148  2.0000000000000003e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
522 aa  148  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
1150 aa  147  5e-34  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  56.55 
 
 
530 aa  147  6e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  51.83 
 
 
394 aa  146  9e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
715 aa  145  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
858 aa  145  2e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  51.18 
 
 
538 aa  144  3e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  55.86 
 
 
531 aa  144  3e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  51.37 
 
 
544 aa  143  9.999999999999999e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  53.25 
 
 
540 aa  142  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  50 
 
 
407 aa  140  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  57.72 
 
 
538 aa  140  3.9999999999999997e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  50.58 
 
 
538 aa  140  6e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
644 aa  140  7e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  51.95 
 
 
543 aa  139  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  50 
 
 
623 aa  138  2e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  47.74 
 
 
698 aa  137  3.0000000000000003e-31  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  50.97 
 
 
540 aa  137  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  48.12 
 
 
540 aa  137  6.0000000000000005e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.24 
 
 
533 aa  136  9e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
528 aa  136  9.999999999999999e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
573 aa  135  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  44.23 
 
 
538 aa  135  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  52.74 
 
 
545 aa  135  1.9999999999999998e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  52.7 
 
 
347 aa  135  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  43.17 
 
 
656 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007643  Rru_A1712  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.07 
 
 
500 aa  134  3e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  50.32 
 
 
397 aa  134  3e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
702 aa  134  3e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  41.67 
 
 
535 aa  134  5e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
698 aa  133  6e-30  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  49.03 
 
 
559 aa  132  1.0000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  49.03 
 
 
690 aa  132  1.0000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4789  methyl-accepting chemotaxis sensory transducer  43 
 
 
493 aa  132  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  47.1 
 
 
656 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  46.45 
 
 
688 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  49.68 
 
 
669 aa  132  2.0000000000000002e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
563 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  50 
 
 
531 aa  132  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  49.66 
 
 
535 aa  131  3e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
730 aa  131  3e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
563 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  51.92 
 
 
533 aa  131  4.0000000000000003e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  46.45 
 
 
691 aa  130  4.0000000000000003e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
688 aa  130  5.0000000000000004e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
688 aa  130  5.0000000000000004e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  47.1 
 
 
563 aa  130  5.0000000000000004e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
563 aa  130  7.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  47.1 
 
 
561 aa  130  8.000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  48.86 
 
 
536 aa  130  8.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  40.98 
 
 
656 aa  129  9.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
563 aa  129  9.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  47.1 
 
 
561 aa  129  1.0000000000000001e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
529 aa  129  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
568 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
563 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
657 aa  129  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  46.45 
 
 
688 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  44.19 
 
 
563 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  40.5 
 
 
566 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  46.45 
 
 
556 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  45.16 
 
 
552 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  48.73 
 
 
697 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
741 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  46.45 
 
 
564 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007778  RPB_1977  methyl-accepting chemotaxis sensory transducer  48.65 
 
 
651 aa  127  4.0000000000000003e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.064764  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
561 aa  127  4.0000000000000003e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  46.45 
 
 
561 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
673 aa  127  5e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
731 aa  127  5e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
563 aa  127  5e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
655 aa  127  5e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  47.1 
 
 
602 aa  127  6e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  45.16 
 
 
736 aa  127  7e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  46.63 
 
 
565 aa  127  7e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  44.52 
 
 
716 aa  126  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_009485  BBta_4931  putative methyl-accepting chemotaxis protein  46.11 
 
 
567 aa  127  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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