15 homologs were found in PanDaTox collection
for query gene Ajs_0195 on replicon NC_008782
Organism: Acidovorax sp. JS42



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008782  Ajs_0195  type III restriction system methylase  100 
 
 		 213 aa  440  1e-123  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0927  type III restriction system methylase  74.53 
 
 		 213 aa  339  2e-92  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.714922 
 
 
-
 
NC_010831  Cphamn1_0748  type III restriction system methylase  74.88 
 
 		 214 aa  337  5.9999999999999996e-92  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.124073 
 
 
-
 
NC_009484  Acry_2423  hypothetical protein  73.79 
 
 		 218 aa  325  4.0000000000000003e-88  Acidiphilium cryptum JF-5  Bacteria  normal  0.351192  n/a   
 
 
-
 
NC_009767  Rcas_2229  type III restriction system methylase  47.89 
 
 		 221 aa  183  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0764738  hitchhiker  0.00005113 
 
 
-
 
NC_009943  Dole_0903  type III restriction system methylase  42.79 
 
 		 215 aa  153  2e-36  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0306366  n/a   
 
 
-
 
NC_008532  STER_1331  type II restriction-modification system modification subunit  41.77 
 
 		 224 aa  126  2.0000000000000002e-28  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.0000710469  n/a   
 
 
-
 
NC_008699  Noca_1587  type II restriction-modification system modification subunit  36.06 
 
 		 221 aa  112  4.0000000000000004e-24  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0544  hypothetical protein  34.75 
 
 		 1093 aa  54.3  0.000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_2355  N-6 DNA methylase  28.97 
 
 		 1038 aa  46.6  0.0003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2228  site-specific DNA-methyltransferase (adenine-specific)  45.28 
 
 		 526 aa  45.4  0.0006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0314397  hitchhiker  0.0000846728 
 
 
-
 
NC_009943  Dole_3141  N-6 DNA methylase  30.2 
 
 		 746 aa  45.4  0.0006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A2666  type I restriction-modification system specificity subunit  31.11 
 
 		 508 aa  43.9  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.289078  normal  0.157244 
 
 
-
 
NC_011831  Cagg_2592  hypothetical protein  30 
 
 		 1339 aa  43.1  0.003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.565404  hitchhiker  0.000489463 
 
 
-
 
NC_009524  PsycPRwf_1121  hypothetical protein  27.2 
 
 		 325 aa  42.4  0.005  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>