11 homologs were found in PanDaTox collection
for query gene Ajs_0042 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_0042  calcium-binding EF-hand-containing protein  100 
 
 
126 aa  246  9e-65  Acidovorax sp. JS42  Bacteria  normal  0.352285  normal  0.420457 
 
 
-
 
NC_011992  Dtpsy_0062  calcium-binding EF-hand-containing protein  99.21 
 
 
126 aa  243  8e-64  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0065  signal transduction protein  49.18 
 
 
122 aa  100  1e-20  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0097  calcium-binding EF-hand-containing protein  51.82 
 
 
132 aa  97.8  5e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3772  hypothetical protein  51.61 
 
 
106 aa  63.2  0.000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0190888 
 
 
-
 
NC_007948  Bpro_0112  acid shock protein-like  51.11 
 
 
126 aa  52.8  0.000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.51175 
 
 
-
 
NC_008048  Sala_0757  hypothetical protein  36.23 
 
 
203 aa  43.5  0.001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2469  putative signal transduction protein with EFhand domain  43.48 
 
 
125 aa  42.7  0.001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.356014  normal 
 
 
-
 
NC_007794  Saro_0440  calcium-binding EF-hand protein  38.03 
 
 
226 aa  42.7  0.002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0765893  n/a   
 
 
-
 
NC_009636  Smed_1986  putative signal peptide protein  33.33 
 
 
122 aa  40.8  0.006  Sinorhizobium medicae WSM419  Bacteria  normal  0.534123  normal 
 
 
-
 
NC_008751  Dvul_1140  calcium-binding EF-hand-containing protein  46.94 
 
 
269 aa  40  0.01  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.229297 
 
 
-
 
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