30 homologs were found in PanDaTox collection
for query gene Afer_1784 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_1784  pyridoxamine 5'-phosphate oxidase-related FMN- binding  100 
 
 
152 aa  298  2e-80  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.512721  n/a   
 
 
-
 
NC_013739  Cwoe_5786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  46.1 
 
 
155 aa  128  3e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_013441  Gbro_3217  PPOX class putative F420-dependent enzyme  44.59 
 
 
166 aa  122  1e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.732162  n/a   
 
 
-
 
NC_008699  Noca_2812  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.67 
 
 
165 aa  122  2e-27  Nocardioides sp. JS614  Bacteria  normal  0.705928  n/a   
 
 
-
 
NC_014158  Tpau_3814  PPOX class putative F420-dependent enzyme  44.3 
 
 
165 aa  118  3e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8252  hypothetical protein  41.33 
 
 
154 aa  116  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.625499  decreased coverage  0.00874096 
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.72 
 
 
165 aa  115  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.95 
 
 
169 aa  114  6e-25  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.95 
 
 
169 aa  114  6e-25  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0501649 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  42.95 
 
 
169 aa  114  6e-25  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_008726  Mvan_0059  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.4 
 
 
165 aa  112  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.291977 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  41.5 
 
 
163 aa  112  2.0000000000000002e-24  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_009953  Sare_2829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.95 
 
 
159 aa  106  9.000000000000001e-23  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0474481 
 
 
-
 
NC_013510  Tcur_1069  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.06 
 
 
158 aa  104  4e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38270  Pyridoxamine 5'-phosphate oxidase  40 
 
 
161 aa  103  7e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2632  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.13 
 
 
160 aa  99  2e-20  Salinispora tropica CNB-440  Bacteria  normal  0.224595  normal  0.27403 
 
 
-
 
NC_013131  Caci_2179  pyridoxamine 5'-phosphate oxidase-related FMN- binding  40 
 
 
151 aa  90.9  5e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0582  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.97 
 
 
150 aa  72  0.000000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1437  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.56 
 
 
150 aa  66.6  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3705  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.97 
 
 
152 aa  55.1  0.0000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0831  putative F420-dependent enzyme  33.33 
 
 
141 aa  53.1  0.000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.981538  decreased coverage  0.00628488 
 
 
-
 
NC_010085  Nmar_0178  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.56 
 
 
133 aa  49.7  0.00001  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.210091 
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  34.62 
 
 
141 aa  48.1  0.00004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_014158  Tpau_1993  PPOX class putative F420-dependent enzyme  29.63 
 
 
144 aa  46.6  0.0001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.98914  n/a   
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  23.7 
 
 
146 aa  46.2  0.0002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_009077  Mjls_5389  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.32 
 
 
279 aa  44.7  0.0005  Mycobacterium sp. JLS  Bacteria  normal  0.205985  normal  0.862056 
 
 
-
 
NC_012029  Hlac_2159  hypothetical protein  29.32 
 
 
148 aa  43.1  0.001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0515721  normal  0.701984 
 
 
-
 
NC_009921  Franean1_3648  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.36 
 
 
176 aa  43.5  0.001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3517  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.45 
 
 
154 aa  40.4  0.009  Geobacter uraniireducens Rf4  Bacteria  normal  0.0426327  n/a   
 
 
-
 
NC_014210  Ndas_1795  putative F420-dependent enzyme  29.93 
 
 
128 aa  40.4  0.009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0896007  normal  0.545256 
 
 
-
 
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