12 homologs were found in PanDaTox collection
for query gene Afer_0245 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_0245  hypothetical protein  100 
 
 
426 aa  823    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.192435  n/a   
 
 
-
 
NC_013124  Afer_0298  NLP/P60 protein  35.33 
 
 
437 aa  95.9  1e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.283102  n/a   
 
 
-
 
NC_013124  Afer_1192  NLP/P60 protein  32 
 
 
365 aa  61.2  0.00000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.058782  n/a   
 
 
-
 
NC_007644  Moth_0246  peptidase M23B  26.86 
 
 
377 aa  48.9  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1486  cell wall endopeptidase, family M23/M37  23.48 
 
 
421 aa  47.8  0.0004  Bacillus cereus B4264  Bacteria  unclonable  0.0000596043  n/a   
 
 
-
 
NC_011772  BCG9842_B3858  cell wall endopeptidase, family M23/M37  23.2 
 
 
424 aa  47.4  0.0005  Bacillus cereus G9842  Bacteria  decreased coverage  0.000000135417  hitchhiker  0.00000000000537806 
 
 
-
 
NC_011886  Achl_2398  Peptidase M23  24.37 
 
 
474 aa  47  0.0006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0487248 
 
 
-
 
NC_008262  CPR_0189  M24/M37 family peptidase  19.38 
 
 
399 aa  45.8  0.001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0191  M24/M37 family peptidase  19.86 
 
 
399 aa  45.1  0.002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5359  cell wall endopeptidase and peptidase, C40, NLP/P60 family fusion protein  21.67 
 
 
485 aa  43.9  0.006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2976  PgdS peptidase. cysteine peptidase. MEROPS family C40  25.25 
 
 
523 aa  43.5  0.007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1354  peptidase M23B  23.47 
 
 
424 aa  43.5  0.008  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.000000810467  n/a   
 
 
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