14 homologs were found in PanDaTox collection
for query gene Acry_3382 on replicon NC_009468
Organism: Acidiphilium cryptum JF-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009468  Acry_3382    100 
 
 
423 bp  839    Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1214  dTDP-glucose 4,6-dehydratase  92.86 
 
 
1056 bp  238  1.0000000000000001e-60  Acidiphilium cryptum JF-5  Bacteria  normal  0.0108326  n/a   
 
 
-
 
NC_009484  Acry_0614  dTDP-glucose 4,6-dehydratase  91.67 
 
 
1071 bp  222  6e-56  Acidiphilium cryptum JF-5  Bacteria  normal  0.0278686  n/a   
 
 
-
 
NC_009958  Dshi_4115  dTDP-glucose 4,6-dehydratase  91.76 
 
 
1041 bp  113  4.0000000000000004e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0560376  normal 
 
 
-
 
NC_009007  RSP_3844  dTDP-glucose 4,6-dehydratase  85.92 
 
 
1041 bp  61.9  0.0000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.919278  n/a   
 
 
-
 
NC_009040  Rsph17029_4078  dTDP-glucose 4,6-dehydratase  85.92 
 
 
1041 bp  61.9  0.0000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29374  normal  0.0761668 
 
 
-
 
NC_007492  Pfl01_0701  dTDP-glucose 4,6-dehydratase  83.53 
 
 
1083 bp  58  0.000002  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.004629  normal 
 
 
-
 
NC_008322  Shewmr7_1399  dTDP-glucose 4,6-dehydratase  94.12 
 
 
1020 bp  52  0.0001  Shewanella sp. MR-7  Bacteria  normal  normal  0.0294946 
 
 
-
 
NC_008686  Pden_2121  dTDP-glucose 4,6-dehydratase  82.93 
 
 
1038 bp  52  0.0001  Paracoccus denitrificans PD1222  Bacteria  normal  0.147251  normal 
 
 
-
 
NC_007498  Pcar_2593  dTDP-glucose 4,6-dehydratase  90.24 
 
 
1089 bp  50.1  0.0005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1224  short-chain dehydrogenase/reductase SDR  100 
 
 
786 bp  50.1  0.0005  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.000362575 
 
 
-
 
NC_010725  Mpop_0602  conserved hypothetical proteinn  100 
 
 
585 bp  48.1  0.002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.117463 
 
 
-
 
NC_010338  Caul_4912  dTDP-glucose 4,6-dehydratase  91.43 
 
 
1050 bp  46.1  0.008  Caulobacter sp. K31  Bacteria  normal  0.949701  normal 
 
 
-
 
NC_011365  Gdia_2992  dTDP-glucose 4,6-dehydratase  86.27 
 
 
1071 bp  46.1  0.008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.147327  normal  0.427533 
 
 
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