13 homologs were found in PanDaTox collection
for query gene Acry_2423 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_2423  hypothetical protein  100 
 
 
218 aa  452  1.0000000000000001e-126  Acidiphilium cryptum JF-5  Bacteria  normal  0.351192  n/a   
 
 
-
 
NC_008025  Dgeo_0927  type III restriction system methylase  72.82 
 
 
213 aa  327  9e-89  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.714922 
 
 
-
 
NC_008782  Ajs_0195  type III restriction system methylase  73.79 
 
 
213 aa  325  4.0000000000000003e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0748  type III restriction system methylase  68.54 
 
 
214 aa  320  8e-87  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.124073 
 
 
-
 
NC_009767  Rcas_2229  type III restriction system methylase  42.72 
 
 
221 aa  168  6e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0764738  hitchhiker  0.00005113 
 
 
-
 
NC_009943  Dole_0903  type III restriction system methylase  40.47 
 
 
215 aa  146  2.0000000000000003e-34  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0306366  n/a   
 
 
-
 
NC_008532  STER_1331  type II restriction-modification system modification subunit  42.41 
 
 
224 aa  119  3.9999999999999996e-26  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.0000710469  n/a   
 
 
-
 
NC_008699  Noca_1587  type II restriction-modification system modification subunit  39.57 
 
 
221 aa  111  7.000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0544  hypothetical protein  33.93 
 
 
1093 aa  52  0.000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2228  site-specific DNA-methyltransferase (adenine-specific)  49.06 
 
 
526 aa  47.4  0.0002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0314397  hitchhiker  0.0000846728 
 
 
-
 
NC_009943  Dole_3141  N-6 DNA methylase  31.2 
 
 
746 aa  44.3  0.001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_1062  hypothetical protein  27.74 
 
 
1231 aa  43.1  0.003  Caldivirga maquilingensis IC-167  Archaea  hitchhiker  0.000818904  hitchhiker  0.00000512763 
 
 
-
 
NC_009524  PsycPRwf_1121  hypothetical protein  22.93 
 
 
325 aa  42  0.006  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>