More than 300 homologs were found in PanDaTox collection
for query gene Acry_1424 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_1424  short-chain dehydrogenase/reductase SDR  100 
 
 
258 aa  506  9.999999999999999e-143  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0736  short-chain dehydrogenase/reductase SDR  61.28 
 
 
265 aa  306  3e-82  Variovorax paradoxus S110  Bacteria  normal  0.425912  n/a   
 
 
-
 
NC_010622  Bphy_0918  short-chain dehydrogenase/reductase SDR  54.85 
 
 
268 aa  254  9e-67  Burkholderia phymatum STM815  Bacteria  normal  0.110514  normal  0.280758 
 
 
-
 
NC_010681  Bphyt_1793  short-chain dehydrogenase/reductase SDR  53.73 
 
 
268 aa  251  1e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  0.152096  normal  0.0130851 
 
 
-
 
NC_007951  Bxe_A2394  putative short-chain dehydrogenase/reductase SDR  53.73 
 
 
268 aa  249  3e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.097477 
 
 
-
 
NC_008254  Meso_2958  short-chain dehydrogenase/reductase SDR  45.31 
 
 
267 aa  176  3e-43  Chelativorans sp. BNC1  Bacteria  normal  0.708336  n/a   
 
 
-
 
NC_007413  Ava_4328  Short-chain dehydrogenase/reductase SDR  40.75 
 
 
294 aa  175  8e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7138  short chain dehydrogenase  41.98 
 
 
260 aa  166  2.9999999999999998e-40  Burkholderia sp. 383  Bacteria  normal  0.998532  normal 
 
 
-
 
NC_009952  Dshi_1049  short chain dehydrogenase  42.08 
 
 
261 aa  155  7e-37  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.027779  normal 
 
 
-
 
NC_009485  BBta_2878  short chain dehydrogenase  40.7 
 
 
258 aa  149  5e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.240803  normal  0.0339025 
 
 
-
 
NC_011004  Rpal_1937  short chain dehydrogenase  40.23 
 
 
259 aa  139  4.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.157312  n/a   
 
 
-
 
NC_007347  Reut_A2505  Short-chain dehydrogenase/reductase SDR  38.7 
 
 
262 aa  135  5e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.80685  n/a   
 
 
-
 
NC_013132  Cpin_3042  short-chain dehydrogenase/reductase SDR  34.85 
 
 
264 aa  133  3e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0216  short-chain dehydrogenase/reductase SDR  35.55 
 
 
260 aa  132  5e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1866  short-chain dehydrogenase/reductase SDR  36.58 
 
 
265 aa  132  6e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_3779  short-chain dehydrogenase/reductase SDR  33.98 
 
 
266 aa  132  6.999999999999999e-30  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00111461  n/a   
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  35.66 
 
 
264 aa  130  2.0000000000000002e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1054  short-chain dehydrogenase/reductase SDR  37.11 
 
 
260 aa  129  6e-29  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2383  short-chain dehydrogenase/reductase SDR  36.5 
 
 
263 aa  127  1.0000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  0.378112  normal 
 
 
-
 
NC_008390  Bamb_2330  short-chain dehydrogenase/reductase SDR  36.36 
 
 
259 aa  127  1.0000000000000001e-28  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2208  short-chain dehydrogenase/reductase SDR  36.36 
 
 
259 aa  127  1.0000000000000001e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.336154  normal  0.942948 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  38.7 
 
 
254 aa  127  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5619  Short-chain dehydrogenase/reductase SDR  36.82 
 
 
277 aa  127  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  0.0753007  normal 
 
 
-
 
NC_008781  Pnap_3235  short-chain dehydrogenase/reductase SDR  37.59 
 
 
264 aa  127  2.0000000000000002e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1983  short-chain dehydrogenase/reductase SDR  36.12 
 
 
263 aa  126  3e-28  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4637  short chain dehydrogenase  36.05 
 
 
269 aa  126  3e-28  Ralstonia pickettii 12D  Bacteria  normal  0.0597104  normal  0.0798604 
 
 
-
 
NC_010678  Rpic_4505  short chain dehydrogenase  36.05 
 
 
269 aa  126  3e-28  Ralstonia pickettii 12J  Bacteria  normal  0.15196  normal  0.998314 
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  33.46 
 
 
261 aa  126  4.0000000000000003e-28  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  38.31 
 
 
254 aa  126  4.0000000000000003e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_007951  Bxe_A3257  putative 3-oxoacyl-acyl carrier protein reductase  34.5 
 
 
259 aa  125  6e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.0566153  normal  0.418945 
 
 
-
 
NC_011984  Avi_9124  gluconate 5-dehydrogenase  32.43 
 
 
256 aa  125  6e-28  Agrobacterium vitis S4  Bacteria  normal  0.991877  n/a   
 
 
-
 
NC_012858  Rleg_7084  gluconate 5-dehydrogenase  34.36 
 
 
255 aa  125  7e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3574  short chain dehydrogenase  34.11 
 
 
267 aa  124  1e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.11528  n/a   
 
 
-
 
NC_009485  BBta_0777  gluconate 5-dehydrogenase  34.12 
 
 
251 aa  124  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.618291  hitchhiker  0.00200145 
 
 
-
 
NC_010681  Bphyt_1303  short-chain dehydrogenase/reductase SDR  33.86 
 
 
259 aa  123  3e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.154867  normal  0.0871554 
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  33.98 
 
 
286 aa  123  3e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_013595  Sros_4239  short chain dehydrogenase  33.83 
 
 
268 aa  123  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0369625 
 
 
-
 
NC_013922  Nmag_1055  short-chain dehydrogenase/reductase SDR  32.55 
 
 
258 aa  122  7e-27  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008009  Acid345_0122  short-chain dehydrogenase/reductase SDR  34.9 
 
 
256 aa  122  7e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.105219 
 
 
-
 
NC_008146  Mmcs_2657  short-chain dehydrogenase/reductase SDR  36.26 
 
 
253 aa  122  7e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2687  short-chain dehydrogenase/reductase SDR  36.26 
 
 
253 aa  122  7e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2609  short-chain dehydrogenase/reductase SDR  33.72 
 
 
250 aa  122  7e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.328906 
 
 
-
 
NC_008705  Mkms_2702  short-chain dehydrogenase/reductase SDR  36.26 
 
 
253 aa  122  7e-27  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0205678 
 
 
-
 
NC_010002  Daci_0958  short chain dehydrogenase  34.1 
 
 
265 aa  122  8e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3777  short-chain dehydrogenase/reductase SDR  36.4 
 
 
262 aa  121  9e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2186  dehydrogenase/reductase oxidoreductase protein  38.17 
 
 
263 aa  121  9.999999999999999e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.158551  normal 
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  31.34 
 
 
262 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009379  Pnuc_1069  short-chain dehydrogenase/reductase SDR  32.44 
 
 
261 aa  121  9.999999999999999e-27  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.199007  n/a   
 
 
-
 
NC_008463  PA14_10840  putative dehydrogenase  37.02 
 
 
250 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000000391035  normal 
 
 
-
 
NC_010508  Bcenmc03_2315  short-chain dehydrogenase/reductase SDR  35.57 
 
 
259 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.400056 
 
 
-
 
NC_006349  BMAA2089  putative polyketide synthase  37.84 
 
 
2338 aa  120  1.9999999999999998e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3147  putative polyketide synthase  37.84 
 
 
2258 aa  120  1.9999999999999998e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  32.55 
 
 
258 aa  120  1.9999999999999998e-26  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009636  Smed_3570  short-chain dehydrogenase/reductase SDR  34.36 
 
 
259 aa  120  1.9999999999999998e-26  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00199675 
 
 
-
 
NC_009079  BMA10247_A2380  putative polyketide synthase  37.84 
 
 
2287 aa  120  1.9999999999999998e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2275  short-chain dehydrogenase/reductase SDR  34.66 
 
 
254 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2333  gluconate 5-dehydrogenase  33.71 
 
 
259 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.885017  n/a   
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  33.83 
 
 
261 aa  120  1.9999999999999998e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010002  Daci_4471  short-chain dehydrogenase/reductase SDR  35.8 
 
 
270 aa  120  1.9999999999999998e-26  Delftia acidovorans SPH-1  Bacteria  normal  0.0156103  normal  0.420839 
 
 
-
 
NC_010338  Caul_2720  short-chain dehydrogenase/reductase SDR  38.93 
 
 
256 aa  120  3e-26  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2292  short-chain dehydrogenase/reductase SDR  35.18 
 
 
259 aa  119  3e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2453  short-chain dehydrogenase/reductase SDR  38.22 
 
 
249 aa  119  3.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.728081  n/a   
 
 
-
 
NC_008060  Bcen_1680  short-chain dehydrogenase/reductase SDR  35.55 
 
 
285 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0641216  n/a   
 
 
-
 
NC_009636  Smed_3034  short-chain dehydrogenase/reductase SDR  33.72 
 
 
256 aa  119  3.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.872247 
 
 
-
 
NC_004311  BRA0013  2,3-dihydroxybenzoate-2,3-dehydrogenase  35.69 
 
 
258 aa  119  4.9999999999999996e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_2072  short-chain dehydrogenase/reductase SDR  33.72 
 
 
259 aa  119  4.9999999999999996e-26  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_012560  Avin_46750  Short-chain dehydrogenase/reductase SDR  30.89 
 
 
257 aa  119  4.9999999999999996e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.658343  n/a   
 
 
-
 
NC_009504  BOV_A0010  2,3-dihydroxybenzoate-2,3-dehydrogenase  35.69 
 
 
258 aa  119  4.9999999999999996e-26  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1515  acetoacetyl-CoA reductase  33.33 
 
 
249 aa  119  4.9999999999999996e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0732362  n/a   
 
 
-
 
NC_008784  BMASAVP1_1116  putative polyketide synthase  37.74 
 
 
2294 aa  119  4.9999999999999996e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.107556  n/a   
 
 
-
 
NC_014212  Mesil_0154  short-chain dehydrogenase/reductase SDR  33.98 
 
 
255 aa  119  6e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  0.649375  normal  0.270956 
 
 
-
 
NC_010623  Bphy_4238  short chain dehydrogenase  33.46 
 
 
268 aa  117  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1841  putative 3-ketoacyl-CoA reductase  38.7 
 
 
250 aa  118  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1477  beta keto-acyl synthase  37.84 
 
 
2273 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3168  short chain dehydrogenase  37.4 
 
 
283 aa  118  9.999999999999999e-26  Variovorax paradoxus S110  Bacteria  normal  0.149072  n/a   
 
 
-
 
NC_011992  Dtpsy_0126  short-chain dehydrogenase/reductase SDR  34.38 
 
 
268 aa  117  9.999999999999999e-26  Acidovorax ebreus TPSY  Bacteria  normal  0.430043  n/a   
 
 
-
 
NC_011126  HY04AAS1_0509  3-oxoacyl-(acyl-carrier-protein) reductase  32.28 
 
 
245 aa  117  9.999999999999999e-26  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2062  short-chain dehydrogenase/reductase SDR  35.25 
 
 
259 aa  118  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  0.861645  normal  0.226141 
 
 
-
 
NC_008782  Ajs_0109  short-chain dehydrogenase/reductase SDR  34.38 
 
 
268 aa  117  9.999999999999999e-26  Acidovorax sp. JS42  Bacteria  normal  normal  0.233073 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  36.58 
 
 
261 aa  117  1.9999999999999998e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1462  short chain dehydrogenase  36.02 
 
 
259 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  0.780505  normal  0.472933 
 
 
-
 
NC_009429  Rsph17025_3588  hypothetical protein  35.16 
 
 
254 aa  117  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  decreased coverage  0.00208776  normal  0.410255 
 
 
-
 
NC_007651  BTH_I1017  short chain dehydrogenase/reductase family oxidoreductase  36.29 
 
 
325 aa  117  1.9999999999999998e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0620  short-chain dehydrogenase/reductase SDR  32.95 
 
 
255 aa  117  1.9999999999999998e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.58504  normal 
 
 
-
 
NC_008146  Mmcs_2791  short chain dehydrogenase  36.05 
 
 
256 aa  117  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  0.298424  n/a   
 
 
-
 
NC_009484  Acry_1422  short-chain dehydrogenase/reductase SDR  37.26 
 
 
253 aa  117  1.9999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  0.182902  n/a   
 
 
-
 
NC_008686  Pden_1769  3-oxoacyl-(acyl-carrier-protein) reductase  36 
 
 
245 aa  117  1.9999999999999998e-25  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.485655 
 
 
-
 
NC_008705  Mkms_2835  short chain dehydrogenase  36.05 
 
 
256 aa  117  1.9999999999999998e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2818  short chain dehydrogenase  36.05 
 
 
256 aa  117  1.9999999999999998e-25  Mycobacterium sp. JLS  Bacteria  normal  0.101264  normal 
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  35.5 
 
 
246 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0986  short-chain dehydrogenase/reductase SDR  35.91 
 
 
278 aa  117  3e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  37.17 
 
 
339 aa  116  3e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004310  BR1122  short chain dehydrogenase/reductase family oxidoreductase  35.63 
 
 
246 aa  116  3.9999999999999997e-25  Brucella suis 1330  Bacteria  normal  0.0726405  n/a   
 
 
-
 
NC_014165  Tbis_1584  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  116  3.9999999999999997e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.296993 
 
 
-
 
NC_007510  Bcep18194_A3725  Short-chain dehydrogenase/reductase SDR  31.8 
 
 
269 aa  116  3.9999999999999997e-25  Burkholderia sp. 383  Bacteria  normal  0.725023  normal  0.155936 
 
 
-
 
NC_008044  TM1040_1803  short-chain dehydrogenase/reductase SDR  34.85 
 
 
259 aa  116  3.9999999999999997e-25  Ruegeria sp. TM1040  Bacteria  normal  0.560822  normal  0.0105475 
 
 
-
 
NC_009441  Fjoh_3849  short chain dehydrogenase  32.44 
 
 
260 aa  115  5e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4702  short-chain dehydrogenase/reductase SDR  32.3 
 
 
258 aa  115  5e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.549001  normal  0.44275 
 
 
-
 
NC_013132  Cpin_4238  short chain dehydrogenase  33.97 
 
 
264 aa  115  6.9999999999999995e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.210209  normal  0.968836 
 
 
-
 
NC_010508  Bcenmc03_0608  short-chain dehydrogenase/reductase SDR  31.8 
 
 
257 aa  115  6.9999999999999995e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.600374  normal 
 
 
-
 
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