4 homologs were found in PanDaTox collection
for query gene Aboo_R0035 on replicon NC_013926
Organism: Aciduliprofundum boonei T469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013926  Aboo_R0035  tRNA-Cys  100 
 
 
72 bp  143  6e-33  Aciduliprofundum boonei T469  Archaea  decreased coverage  0.00020868  n/a   
 
 
-
 
NC_007778  RPB_R0038  tRNA-Cys  96.15 
 
 
74 bp  44.1  0.004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.28254  normal 
 
 
-
 
NC_007925  RPC_R0033  tRNA-Cys  96.15 
 
 
74 bp  44.1  0.004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0980795  normal  0.992488 
 
 
-
 
NC_007958  RPD_R0042  tRNA-Cys  96.15 
 
 
74 bp  44.1  0.004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.217311  normal  0.0105918 
 
 
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