12 homologs were found in PanDaTox collection
for query gene Aave_1718 on replicon NC_008752
Organism: Acidovorax citrulli AAC00-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008752  Aave_1718  hypothetical protein  100 
 
 
316 aa  653    Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.0000662496  unclonable  0.0000000124796 
 
 
-
 
NC_011353  ECH74115_2877  antirepressor protein  47.57 
 
 
334 aa  204  2e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000364001 
 
 
-
 
NC_011353  ECH74115_3525  anti-repressor protein Ant  51.26 
 
 
189 aa  133  3.9999999999999996e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.860875  hitchhiker  0.000134642 
 
 
-
 
NC_009656  PSPA7_2424  anti-repressor protein Ant  39.59 
 
 
315 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.638459  n/a   
 
 
-
 
NC_011353  ECH74115_1530  anti-repressor protein Ant  48.74 
 
 
189 aa  129  6e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_1775  anti-repressor protein Ant  48.74 
 
 
189 aa  129  6e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.271275  normal  0.0239228 
 
 
-
 
NC_011353  ECH74115_2253  anti-repressor protein Ant  48.74 
 
 
189 aa  129  6e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000406549 
 
 
-
 
NC_011353  ECH74115_3142  anti-repressor protein Ant  48.74 
 
 
189 aa  129  6e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.682869  hitchhiker  0.00000000668139 
 
 
-
 
NC_008781  Pnap_3322  hypothetical protein  41.59 
 
 
183 aa  94.4  2e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3253  KilA domain-containing protein  64.15 
 
 
259 aa  73.6  0.000000000005  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.0000000000473609  decreased coverage  0.00000000000000635561 
 
 
-
 
NC_010159  YpAngola_A2380  BRO domain-containing protein  40 
 
 
335 aa  62  0.00000001  Yersinia pestis Angola  Bacteria  normal  0.016925  normal  0.26363 
 
 
-
 
NC_013947  Snas_5403  hypothetical protein  31.67 
 
 
273 aa  59.7  0.00000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.286654 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>