13 homologs were found in PanDaTox collection
for query gene AFE_3115 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2713  hypothetical protein  100 
 
 
161 aa  309  1e-83  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  unclonable  0.0000000000196179 
 
 
-
 
NC_011761  AFE_3115  hypothetical protein  100 
 
 
161 aa  309  1e-83  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0408  Protein of unknown function DUF2495  49.38 
 
 
140 aa  76.3  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.991858  normal 
 
 
-
 
NC_013946  Mrub_1553  hypothetical protein  43.21 
 
 
145 aa  71.6  0.000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  decreased coverage  0.000880157 
 
 
-
 
NC_008576  Mmc1_3411  hypothetical protein  45.12 
 
 
158 aa  70.1  0.00000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A3334  hypothetical protein  29.93 
 
 
168 aa  67.4  0.00000000008  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.129263  normal  0.0637905 
 
 
-
 
NC_008025  Dgeo_0789  hypothetical protein  42.55 
 
 
169 aa  63.2  0.000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.802988 
 
 
-
 
NC_007955  Mbur_0477  hypothetical protein  38.37 
 
 
144 aa  59.3  0.00000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.446082  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0328  hypothetical protein  29.21 
 
 
141 aa  58.9  0.00000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0943  hypothetical protein  41.25 
 
 
156 aa  53.9  0.0000009  Acidiphilium cryptum JF-5  Bacteria  normal  0.367982  n/a   
 
 
-
 
NC_011726  PCC8801_3605  hypothetical protein  40.26 
 
 
165 aa  45.1  0.0004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2509  hypothetical protein  40.26 
 
 
165 aa  45.1  0.0004  Cyanothece sp. PCC 8802  Bacteria  decreased coverage  0.000566175  normal  0.406315 
 
 
-
 
NC_011729  PCC7424_0480  membrane protein-like protein  38.55 
 
 
190 aa  41.2  0.007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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