11 homologs were found in PanDaTox collection
for query gene AFE_2304 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_2304  TonB family protein  100 
 
 
259 aa  508  1e-143  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1947  TonB family protein  100 
 
 
218 aa  426  1e-118  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_1944  TonB family protein  33.88 
 
 
242 aa  87  3e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2301  TonB family protein  33.88 
 
 
242 aa  87  3e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1621  TonB-dependent receptor, putative, authentic frameshift  25.12 
 
 
227 aa  53.9  0.000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614853  n/a   
 
 
-
 
NC_007947  Mfla_2306  TonB-like protein  27.53 
 
 
246 aa  47.4  0.0002  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.0143972 
 
 
-
 
NC_013721  HMPREF0424_0610  pullulanase, type I  26.32 
 
 
1888 aa  47.8  0.0002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_2159  TonB family protein  26.15 
 
 
277 aa  46.6  0.0004  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3466  SH3 type 3 domain-containing protein  42.25 
 
 
1281 aa  45.8  0.0007  Clostridium phytofermentans ISDg  Bacteria  normal  0.180669  n/a   
 
 
-
 
NC_013161  Cyan8802_2208  hypothetical protein  35.71 
 
 
1218 aa  43.5  0.003  Cyanothece sp. PCC 8802  Bacteria  unclonable  0.00220427  normal  0.956264 
 
 
-
 
NC_002939  GSU2981  TonB-dependent receptor, putative  26.23 
 
 
289 aa  42.4  0.007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
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