6 homologs were found in PanDaTox collection
for query gene ABOO_t25 on replicon NC_013926
Organism: Aciduliprofundum boonei T469



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013926  ABOO_t25  tRNA-Pro  100 
 
 
126 bp  250  7e-65  Aciduliprofundum boonei T469  Archaea  normal  0.154394  n/a   
 
 
-
 
NC_013926  Aboo_R0036  tRNA-Pro  100 
 
 
76 bp  46.1  0.002  Aciduliprofundum boonei T469  Archaea  normal  0.591858  n/a   
 
 
-
 
NC_012029  Hlac_R0034  tRNA-Pro  91.18 
 
 
73 bp  44.1  0.008  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  decreased coverage  0.00151973 
 
 
-
 
NC_013158  Huta_R0015  tRNA-Pro  91.18 
 
 
73 bp  44.1  0.008  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_R0025  tRNA-Pro  91.18 
 
 
73 bp  44.1  0.008  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0907753  normal 
 
 
-
 
NC_013743  Htur_R0020  tRNA-Pro  91.18 
 
 
73 bp  44.1  0.008  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>