10 homologs were found in PanDaTox collection
for query gene A2cp1_1780 on replicon NC_011891
Organism: Anaeromyxobacter dehalogenans 2CP-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011891  A2cp1_1780  hypothetical protein  100 
 
 
238 aa  437  9.999999999999999e-123  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.882538  n/a   
 
 
-
 
NC_011145  AnaeK_1709  hypothetical protein  90.34 
 
 
234 aa  305  4.0000000000000004e-82  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.0053762  n/a   
 
 
-
 
NC_007760  Adeh_2169  hypothetical protein  85.29 
 
 
269 aa  268  8e-71  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3594  hypothetical protein  55.29 
 
 
172 aa  92.4  6e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00516633 
 
 
-
 
NC_007517  Gmet_1019  hypothetical protein  31.9 
 
 
296 aa  64.3  0.000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.166316 
 
 
-
 
NC_014212  Mesil_0251  cytochrome c class I  37.86 
 
 
274 aa  61.6  0.000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0328  cytochrome c, class I  34.81 
 
 
262 aa  57.8  0.0000002  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000000605449  hitchhiker  0.0000000937241 
 
 
-
 
NC_007964  Nham_3450  cytochrome c, class I  41.11 
 
 
326 aa  53.5  0.000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.60831  n/a   
 
 
-
 
NC_007406  Nwi_0773  cytochrome c, class I  40 
 
 
326 aa  51.2  0.00001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0202  cytochrome c class I  31.75 
 
 
264 aa  48.9  0.00007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
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