Gene Aazo_5348 details

Gene Information

• Locus tag: Aazo_5348
• ID: 9343214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014250
• Strand: -
• Start bp: 3332
• End bp: 6841
• Gene Length: 3510 bp
• Protein Length: 1169 aa
• Translation table: 11
• GC content: 40%
• Product: Primase 2
• Protein accession: YP_003723436
• Protein GI: 298501440

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.396058
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAAATA ACCATCACGC ATTGCAGCTA AATCTTGAAC AAACACCGAA GTTAAAATTT 
GCTGTCAACA CTTATGGCAG AAATAAAGAC TGGGATTTTA AGAAACTAGC TGCTAACTTT 
CAAGATAAAG AAGGCACAAT AGAGAACGTT AAAGAACATA TTAAAGCAGG TCACGCTGTT 
TGTGCCAGCT TATTGGGTAA TAAATGGCGG AGTAAGGCCA ATGTTATCGG TTCTCAATGG 
TTATTACTTG ACATCGATAA TTCTGATATG GCCCGTGATG CAGACGGTAA GCTAATTAAG 
GATAATTATG GGAATTACAT CAAAGTTTAT AAGCACCAGT TAACTATTGA AGAAGCCTTA 
ACCCATCCCT TCATTAGAAA ATACTGTGCT TTGATTTATA CCACTGCTAG TCATCAACCA 
GACTGGCATA GATTCCGACT TATTTTCCTT CTGCCAGAAT ATGTTGAGGG TGCTGACATT 
GTTGAAACTT GTATACACCT CTTAATGCAA CATCTACCCC ATGACCGTGC GTGTAGAGAT 
GCTTCTCGTG TCTTTTACGG TAATACAGAA GCAGAATTCC TGTTGGTCAA TCCTGAAGCT 
AGTTTACCAA ATGAATGGGT AAGGGAAGCA ATTACAATCA CACAACAGGA ACGTAGTGAG 
TATCAGCTAC ACATTCAAGA AATTGAGTTA CGGCATAAGA AGTGGCGTGA AATTTCCCTT 
ATTGAAGGCT GGGATATTGA CCAGCTTATT AAGAACGCAC TTTCATTAAT TCCACCGCGT 
ACCCTTGGGA GTGGAAACTA TGATGAATGT CGCCAAGTAC TGATGGCTTT GGTCAATCAC 
TACGGGGCAT CTGAAGCAGA AATTATTGCT GAGAAATGGT CGCCTTCGAT CAAGGGTACA 
ACTTGGAACA TTCGTGCCAA AATCCGCAGT TTTAGGCGTG GTGGGATTAC GATCGGTACA 
CTATTCCACA TCGCTAAGGA GTATGGTTTT CACTTTCCAA AACGGCAGTA TGAAGTATCC 
GAAAACTATA AAGGACTCAC TAGTCCTCAA GAATGCGAAC TAGGACAATT CAGAGAAGAT 
TTGACCAGCT TCCAGAATTT ATTAAAACAG GCGCTTATAC CTTTTGTTAA AGGTGCTAAA 
GGATTTTCCA CTCCCATATT AAGGGGAGCA CAATTCGTAA GAGAGGAACC AAAACTTGAG 
ATTAACTCCC CAATACGTAA GTTCATCGTC TATAAGCCGG GGAATATCCC ATACAAAAAC 
GAATTTATAG ATGACATCTA TATTGAATGC CAAGCAGGAG AACATATCGC CGCATGGGTC 
GAAGCAATTT CTAAAGGCTG GACACAAATT TTAGACAATT CTCATCCAGG TCAGGGTAAA 
TCTCACAATG CTGGTAAACT GACGGCTGCC ATGTTCGGTA CAGATAAACT AATTTACCAA 
GATGCAAACC ACAGAAACCC ATCTACCTTA CCGATTGAGA TTAATTTTGT TGACTTACCT 
GTGCGGCACA ACGGCTTGAA AATTGACACT AACCGTACTA CTCCAACTGG TGCTAATTTT 
CTAGTACAAC CTAAAGTGGG TGAAACTCCT GATACTGATA GTAACTGTAG GAGAACTAGT 
TTATTTGGTG CGTTCCGTGA TAAGAACTTT GCTTCTTTAG ATTTTGAAGA AAGTGCTATT 
AGCCCTATCT GTAAGGGTTG TATTAATCAC AATCAGTGCT GTTTCACTTA TGGTGATGGT 
TTCGGCTTCC GTTTTCTAAA GCAGATAGTA ATCCAAAATT ACGCCGAAAT TCGAGCACAT 
CCTGACTCTA CCCCAGTTGT TTTAACTAAC GGTGCTAATG AACCTTTCAC TGTGGGACGG 
ATATGGGAAG AAGCAGGAAG TCTTATTAAG CCTGTGCGAT CAATTGAAGT ACGACTACAG 
GATTTTGATA CTACCATTGG TTCCTTAATT GCTGGTGGTT TACCAACTGA GGAATGGGTA 
AAACTCCAGC AGTATTTACC AGTTTTACGA TCACTTCTTA ATGGAGACAT TAAACCTAAT 
TCTCGTTATG GCTTTAACGA TGCTGAATTA AGAGAACAAT TAGGTGAATT TCCGTCTGGA 
ATAGACATTA AAATAATCCG GCAAATATTA CAGCCTAATT TAGAATTCTT GGGTGACCTG 
GATTCTGTTG ATATCAATGG TGATCAACAA CTACGAAAAA GTGCTGCCGC TCATTTTGCT 
GCTAAACGTG TAGCTAAGGA GAGCGCCCAA CAAGCGGGTA AACAGTTCTT TGATTTACCC 
AATTACTGGT TACCTGATTT CCTCGAAGCT TGGAAAGGTG AGGGTTCCCT AGCTTATAAA 
TGGGGTATAT TGACCATTTA TCGCCCTAAT ACTAAATACA GTGAATTAGC TTACTCAGCC 
CAATTCAATA TTTACCTTGA TGCTACTATT AGGCCAGAGC ATTTGAAATT GAAACTTGGT 
TACAATGATT CAATATTAGT CATCCAGCAG TCTCGTCCTG ACTACAGTAA TTTAAGAGTA 
GTTAATGTCA TAGGGCTCGG TAAGTTGCCT AAAAAACGGT CAAGCTCCTT AACTGAACGT 
GTTCTTTCCC TCAAAGAAAC TTTTCGTAAG ATACACAAGA AACTGGGGAT TATTGAGTGG 
AAACAACTTG CTATTAAGAC GGAAGACTAT ATTGAATACA GTCACTTTGT TGATGGTCGT 
GGTGTTAACC GCTTTAGTGA ATGTGATGTC ATTGCTTCTT TTGGCATTCC GTACCAGAAT 
ATTGGTGTAG TAGCTGCACA TATAAAAGTA ATGACTGATG AGGCAGTCCA CGTGGGAAAT 
TTAGAAGGCA TCTTACAAAA ATATCTCACC GAGTTAATCA GGGGTGAGAT TATTCAAGAA 
ATTGGTCGAT TACGCGCTCA TCGTCGCTGC AATGAGGAGT TAATATTTTA CTTCTGTGCT 
GACTATGACT TGAGTTTTTT GTTAGATGAA CTACCAGGTG TAAAGTTAGA GGTTATAGAT 
GCCTGTACTT TATGTACGGA AGCTGGTAGC CGAGATCAGC AGACTGGACA TGCCATTATC 
AAGGCCTTCA ACCAGCTTTT GGAATCCCAA CAGAAAATTT GTCAAACGGC AATTGCAAAA 
ATTATAAACA CTACGCAAGG TTGGGTAAGC AGATTTACCC AACGTTGGGG TGGTTGGGTT 
AGGTTTAAAA AATTATTACT TTTACTATTA GATAGTTTTC ATAGTGATAG TAATAAAAAT 
CTCACAGACC TCAGCGATGA CGAAATTTGG TTTGCTCGTG AATACTTCCC GACACTACTT 
GATAAAGCTA GATCATTACC TGAAGATCCT ATTGAATATA TAGCTGAAGT TACTCTAACG 
GTTACTAAAC CTGTAATGTC GCCCATTCTG CGCCATTTTA GCCCTGCTGT AAAAACTGGT 
TTGCTGTTGA TTGTTTTATC TTCTCTGGCT ACTGAGGTTT ACTTGCACTT TCTCCTGGTA 
CAAGCCGTGA CCAATCCGAT AGTTATCTGA 

 

Protein sequence

MINNHHALQL NLEQTPKLKF AVNTYGRNKD WDFKKLAANF QDKEGTIENV KEHIKAGHAV 
CASLLGNKWR SKANVIGSQW LLLDIDNSDM ARDADGKLIK DNYGNYIKVY KHQLTIEEAL 
THPFIRKYCA LIYTTASHQP DWHRFRLIFL LPEYVEGADI VETCIHLLMQ HLPHDRACRD 
ASRVFYGNTE AEFLLVNPEA SLPNEWVREA ITITQQERSE YQLHIQEIEL RHKKWREISL 
IEGWDIDQLI KNALSLIPPR TLGSGNYDEC RQVLMALVNH YGASEAEIIA EKWSPSIKGT 
TWNIRAKIRS FRRGGITIGT LFHIAKEYGF HFPKRQYEVS ENYKGLTSPQ ECELGQFRED 
LTSFQNLLKQ ALIPFVKGAK GFSTPILRGA QFVREEPKLE INSPIRKFIV YKPGNIPYKN 
EFIDDIYIEC QAGEHIAAWV EAISKGWTQI LDNSHPGQGK SHNAGKLTAA MFGTDKLIYQ 
DANHRNPSTL PIEINFVDLP VRHNGLKIDT NRTTPTGANF LVQPKVGETP DTDSNCRRTS 
LFGAFRDKNF ASLDFEESAI SPICKGCINH NQCCFTYGDG FGFRFLKQIV IQNYAEIRAH 
PDSTPVVLTN GANEPFTVGR IWEEAGSLIK PVRSIEVRLQ DFDTTIGSLI AGGLPTEEWV 
KLQQYLPVLR SLLNGDIKPN SRYGFNDAEL REQLGEFPSG IDIKIIRQIL QPNLEFLGDL 
DSVDINGDQQ LRKSAAAHFA AKRVAKESAQ QAGKQFFDLP NYWLPDFLEA WKGEGSLAYK 
WGILTIYRPN TKYSELAYSA QFNIYLDATI RPEHLKLKLG YNDSILVIQQ SRPDYSNLRV 
VNVIGLGKLP KKRSSSLTER VLSLKETFRK IHKKLGIIEW KQLAIKTEDY IEYSHFVDGR 
GVNRFSECDV IASFGIPYQN IGVVAAHIKV MTDEAVHVGN LEGILQKYLT ELIRGEIIQE 
IGRLRAHRRC NEELIFYFCA DYDLSFLLDE LPGVKLEVID ACTLCTEAGS RDQQTGHAII 
KAFNQLLESQ QKICQTAIAK IINTTQGWVS RFTQRWGGWV RFKKLLLLLL DSFHSDSNKN 
LTDLSDDEIW FAREYFPTLL DKARSLPEDP IEYIAEVTLT VTKPVMSPIL RHFSPAVKTG 
LLLIVLSSLA TEVYLHFLLV QAVTNPIVI