Gene Aazo_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAazo_4185 
Symbol 
ID9341990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism name'Nostoc azollae' 0708 
KingdomBacteria 
Replicon accessionNC_014248 
Strand+ 
Start bp4258520 
End bp4259176 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID 
ProductECF subfamily RNA polymerase sigma 24 subunit 
Protein accessionYP_003722720 
Protein GI298492543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.465475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG CGATTACGGT ATCCTGGTCA ACGGTTGATG CAACTTATTC GGAAGCATCG 
GTGCAAGTTG ACAAACTCTC AAATCACGAT CTAATTTTAC GCTGTCAAGC AGCATTGCGG 
CCAGATAAAG CTGCCTTTGC AGAACTCTTG CGTCGCTATC AGACTCAGGT TGATCGGGTT 
TTATACCACC TAGCCCCTGA TTGGTCTGAC AGAGCCGATT TAGCTCAAGA AGTGTGGATT 
CGAGTCTATC GGAATATTAA CCGATTACAA GAACCTGCTA AATTTCGGGG CTGGTTAAGC 
CGTATTGCCA CTAACTTGTT TTGCGATGAA TTGCGTAAAC GCAAACGGGT GGTTAGTCCC 
CTATCACTAG ATGCTCCTCG TTCCCTAGAA GATGGCGAAA TGGATTGGGA TATTGCTGGT 
GACAGTCCAG GTCCAGAAGA AGAACTGACA ACCAGGGAAT TTTACGAACA ATTGCGAGAT 
GCGATCGCGG ATTTACCAGA AGTATTCCGT ACTACAATCG TTCTCAGAGA AATTGAAGGC 
ATGGCTTATG AAGAAATCGC CGAAATGACA GGCGTTTCAT TAGGAACAGT CAAATCGAGA 
ATAGCTAGAG CCAGATCCAG ATTACAAGCA CAGTTACAAA CCTATCTAGA TACCTAA
 
Protein sequence
MSQAITVSWS TVDATYSEAS VQVDKLSNHD LILRCQAALR PDKAAFAELL RRYQTQVDRV 
LYHLAPDWSD RADLAQEVWI RVYRNINRLQ EPAKFRGWLS RIATNLFCDE LRKRKRVVSP 
LSLDAPRSLE DGEMDWDIAG DSPGPEEELT TREFYEQLRD AIADLPEVFR TTIVLREIEG 
MAYEEIAEMT GVSLGTVKSR IARARSRLQA QLQTYLDT