Gene Aazo_2430 details

Gene Information

• Locus tag: Aazo_2430
• ID: 9340229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 2529774
• End bp: 2533166
• Gene Length: 3393 bp
• Protein Length: 1130 aa
• Translation table: 11
• GC content: 44%
• Product: phycobilisome linker polypeptide
• Protein accession: YP_003721481
• Protein GI: 298491304

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTTA AAGCAAGTGG TGGAAGCTCA GTTGCTCGTC CGCAGCTATA TCAAACCCTA 
ACTGTAGCCA CTATCTCCCA AGCAGAACAG CAAGACCGTT TGCTGGGAAC AGCTGAACTG 
GGTGAACTAG CAACTTATTT TGCATCTGGA GTAAAACGTC TAGAAATCGC TCAAGTTCTG 
ACAGAAAACT CCGAAATCAT CGTTTCTCGC GCTGCTAACC GGATTTTCGT TGGTGGTTCT 
CCCATGTCTT TCTTAGAAAA GCCCAGAGAA CTTGAACTGG CGATGATTGG CAGTGGTGGA 
GATGTCCAAG AAGGAATGAA ACTAGGGACA GTCACCTACG TTGAAAGCCG TGGTGGCTTC 
TTAGAAAATC TCCGTTCTAT CTTCAATACC TCCGCTGGTG GTCCCACACC TGCTGGTTTT 
AGACCCATCA ACGTAGCACG TTATGGTCCT GGCAACATGG CTAAGAGCTT ACGGGATTTA 
TCCTGGTTCT TACGCTACGC CACTTATGCG ATCGTTGCTG GCGATCCCAA CATAATTTCT 
GTCAACACAC GCGGTTTGCG GGAAATAATT GAGAATGCTT GTTCTGGTGA AGCTACCTTA 
GTGGCTTTAC AGGAAATTAA GTCAGCATCC CTATCTTACT TCCGTAAAGA TGCTGTCGCC 
ACTGACATCG TGACTCAGTA CATGGATGTG TTGCTTACTG AATTCCAAGC ACCCACACCA 
TCTACAAAAG TTCGTCAACG TCCTTCTCGC GATCAACAAG GATTACAACT TCCTCAAATT 
TACTTCAACG CTGCTGAACG TCGTCCTAAG TTCGTGATGA AGCCCGGTTT ATCAGCTACT 
GAAAAAATAG AAGTTGTGAA AGCCGCTTAT CGTCAAGTAT TTGAGCGCGA TATCACTCGT 
GCTTACAGCC TGTCCATCTC TGACTTAGAA TCTAAGGTGA AAAGCGGCTG CATCTCTATG 
AAGGAGTTTA TTCGCCGTTT AGCTAAATCT TCTCTTTACC AAAAACAGTT TTACCAACCC 
TTTATTAACA GCCGTGTGAT TGAGTTGGCT TTCCGTCACA TTTTAGGACG AGGACCCAGC 
AGCCGGGAAG AAGTTCAAAA CTACTTCTCA ATTATTTCCA AGGGTGGTTT ACCAGCATTA 
GTTGATACTT TGGTAGATTC TAATGAATAT AGCGATTACT TTGGTGAAGA AACGGTTCCT 
TATCTCCGGG GTTTAGGTCA AGAAGCCCAA GAGTGTAGGA ACTGGGGACA ACAGCAAGAC 
CTGTTTAAAT ACAGTGCGCC TTTCCGTAAA GTTCCTCAAT TTATTACTAC TTTTGCGGGT 
TATGAACAAC CATTGCCTGA CCAACATCCC TACGGTTCTG GTAATGATCC CTTAGAAATT 
CAATTCGGCG CGATTTTCCC TAAAGAAACC CGCAACCCTA GCACCAGCCC TGCACCTTTT 
GGTAAGGATA CCCGCCGGAT CTTGATTCAC CAAGGGCCTG CTATTAATAA CCAACTGAGC 
AATCCTCAAG CGCGGAGTGT AGCTCCTGGT ACTCTTGGTG CTAAGGTGTT TAAGTTAGAC 
CAATTACCTG GAACTATTGG TAAAAAAGCT GCCAAGGGTA CAAGTGTTAA ATTCTCAGAA 
AGCTCTACTC AAGCGGTAAT CAAAGCTGCT TACTTACAAG TTTTCAGTCG TGATGTTTAC 
GAAGGACAAC GACTGAAAGT TGCAGAAATT AAGCTAGAAA ATGGCGATAT TACTGTACGT 
GAGTTTGTAC GGATGTTGGC GAAATCCGAT TTATTCCGTA AGCTGTACTG GACTTCTCTG 
TATGTGTGTA AGTCTATTGA GTATATTCAC CGTCGCTTGC TAGGTCGTCC TACTTACGGT 
CGCCAAGAAA ATAATAAGTA TTTTGACCTT GCGGCTAAGA AGGGTTTCTA CGCAGTTGTT 
GATGCAATTA TTGACAGCGT TGAATACAGC GAAGCTTTCA ATGAAGATAC TGTTCCTTAC 
GAACGCTATT TAACTCCTGC GGGTGTATCT CTGCGTCAAT TGCGAGTTGG TACTATTCGT 
GAAGATGTAG CCAATGTTGA TAAGGAAGTA ACCCCACGCT TTGTGGAATT GGGCGCAGTT 
ACCGAAATGC GGACCCAACC AGATATTGAC TTCCGTATCA ACCAAGGTGT TAGCAAGCAC 
CGTGAACAAA CCAAGATCTT CAAGCTGCTT GCAAATACTG TTGATAAAGT GGCAGTACAG 
ACTTTAATTG GTAGTGCTTA TCGTCAGATT TTTGAACGGG ATATTGCACC TTACATCCTG 
AAAAATGAGT TTACTGTTCT AGAAACTCAG TTGGGTAATG GCGATATTTC TGTTAAGGAA 
TTTGTTCAAG CTCTTGGTTA TTCTAGCCTG TACCTCAAGG AATTTTATAC ACCTTATCCC 
AACACCAAGG TAATTGAGTT GGGTACTAAG CACTTCTTGG GACGCGCACC TATTGACCAA 
GCGGAGATTC GCAAGTATAA CCAAATCTTG GCTACTCAAG GTATCAAGGC GTTTATTGGC 
ACAATGGTCA ATAGTGCTGA GTACGCGCAA GCTTTTGGTG AAGATACTGT TCCTTATCGT 
CGCTTCCCCA CCTTACCTGC GGCTAACTTC CCCAATACAG AGAAGCTTTA CAACCAGCGA 
ACTAAGCAAA ATGATGACTT GGTTGTACCT AGCTTTGAGA CTGTGAAGCC CAGAATTAAG 
ACTGAGAATA CACCAATCTT GGCGAAGGCG ATCGCAGATT TAGCGGCTCA AGCTAAACAA 
ATCGACAAGG CTAACCCCTT GTTTATGGAA TTGGGTCGTT CCTTCAATGA TGGTCGTGGT 
CAGTCTGTAG AAGTTGGTGT TGGTACAATT CGCCGCAAAC CAGCCCGTAT TTACCGCGCA 
ATCACTGGTA CCAATTCTCC CGAAACAAAT CAGGTAATTA ATGCTATTTA TTGTCAAGTA 
ATGGACGTAT TTAGTGGTCA AGTTCCTGAA TATTTACGCC GTAGTGATTT AGATAGCAAA 
CTCCGTAACG GTGAAATTAC TGTGCGTCAA TTTGTCCTTG AACTAGCTAG TTCTGAAATC 
TACCGCAAAC GGTTCTACAC TCCCTATCCC AACACCAAGG TAATTGAGTT CTTATTCCGT 
CACATATTCG GACGCGCACC TGCAACCCAA GGTGAAATCC GTCAATATAA CAAGATATTG 
GCTGATAGAG GTTTAAGGGC TGCTGTAGAA GGGATCGTGA ACAGCCCAGA GTATGCGCGC 
TACTTTGGTG AAGATGTTGT ACCTTACAAC CGCTTCCCCT CTTTACCAGC AGGTAACTAC 
TTGGGTAGTG TACAAGCAGA CGCTGACCTG GTTAAACAAT CTTGGTCTAG CTTATCTCCT 
GCTGTGTTAA CTGGTCGTCC TGGTAACAGA TAG 

 

Protein sequence

MSVKASGGSS VARPQLYQTL TVATISQAEQ QDRLLGTAEL GELATYFASG VKRLEIAQVL 
TENSEIIVSR AANRIFVGGS PMSFLEKPRE LELAMIGSGG DVQEGMKLGT VTYVESRGGF 
LENLRSIFNT SAGGPTPAGF RPINVARYGP GNMAKSLRDL SWFLRYATYA IVAGDPNIIS 
VNTRGLREII ENACSGEATL VALQEIKSAS LSYFRKDAVA TDIVTQYMDV LLTEFQAPTP 
STKVRQRPSR DQQGLQLPQI YFNAAERRPK FVMKPGLSAT EKIEVVKAAY RQVFERDITR 
AYSLSISDLE SKVKSGCISM KEFIRRLAKS SLYQKQFYQP FINSRVIELA FRHILGRGPS 
SREEVQNYFS IISKGGLPAL VDTLVDSNEY SDYFGEETVP YLRGLGQEAQ ECRNWGQQQD 
LFKYSAPFRK VPQFITTFAG YEQPLPDQHP YGSGNDPLEI QFGAIFPKET RNPSTSPAPF 
GKDTRRILIH QGPAINNQLS NPQARSVAPG TLGAKVFKLD QLPGTIGKKA AKGTSVKFSE 
SSTQAVIKAA YLQVFSRDVY EGQRLKVAEI KLENGDITVR EFVRMLAKSD LFRKLYWTSL 
YVCKSIEYIH RRLLGRPTYG RQENNKYFDL AAKKGFYAVV DAIIDSVEYS EAFNEDTVPY 
ERYLTPAGVS LRQLRVGTIR EDVANVDKEV TPRFVELGAV TEMRTQPDID FRINQGVSKH 
REQTKIFKLL ANTVDKVAVQ TLIGSAYRQI FERDIAPYIL KNEFTVLETQ LGNGDISVKE 
FVQALGYSSL YLKEFYTPYP NTKVIELGTK HFLGRAPIDQ AEIRKYNQIL ATQGIKAFIG 
TMVNSAEYAQ AFGEDTVPYR RFPTLPAANF PNTEKLYNQR TKQNDDLVVP SFETVKPRIK 
TENTPILAKA IADLAAQAKQ IDKANPLFME LGRSFNDGRG QSVEVGVGTI RRKPARIYRA 
ITGTNSPETN QVINAIYCQV MDVFSGQVPE YLRRSDLDSK LRNGEITVRQ FVLELASSEI 
YRKRFYTPYP NTKVIEFLFR HIFGRAPATQ GEIRQYNKIL ADRGLRAAVE GIVNSPEYAR 
YFGEDVVPYN RFPSLPAGNY LGSVQADADL VKQSWSSLSP AVLTGRPGNR