Gene Aazo_1971 details

Gene Information

• Locus tag: Aazo_1971
• ID: 9339764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: -
• Start bp: 2051434
• End bp: 2053446
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 42%
• Product: type II secretion system protein E
• Protein accession: YP_003721172
• Protein GI: 298490995

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTACT CGTCACCACA ACGGACTAGC ACCGCGTTAA CTACAAAAAC ACAGTTTTCG 
CCCTTTGGCA ACCACCTAGT GCAATCTGGC TATGTCAACA CTGAACAGAT GAAACAGGCA 
CTAATAGAGA GCCGGAAATC TGGCAAGAAG CTGATAGATG TCCTAGAGTT AATTACTGGG 
CAACAACTAT CAGCAGAGTT TATTCGGGAA CACAAGAAAC AACATCTATT TGAACTAAAA 
ATATTATATG GCGTTGAATC AGTAGATCCA GAAGTCAATC AAATTGGCAA TCTGATGGTT 
GGACAATTGA TTGATAGTCT GATACCAGTC GATGTCTGTC GTCGTCATCG TTTGGTACCG 
CTATGGAAAC GGGAAGACCA AATACCACCT TATGTTTTAG TGGCAATGGT GGAACCAGAT 
AATCTGGATG CTTCTGATGA CCTGAACCGA ATCTTGCGTA ACAAAAACTT ATCCTTACAG 
CGGATGGTGA TTACCCAAGA AGATTACCAG CATCTCATCA ACAAATATTT AGATGAGTTG 
GCTATTCGGG AAAAGGAAAA AGAACAAAAA AGAGATACTG ATATTAATCA GGATATAAAA 
TATCTGGAAG ATCAGGATAT AGAAGAATTT GGTGAGGACA AGGATGCTGA TATCAATGCA 
TCAATTAAGG ATGCTGAAGA TGCACCCATT ATCAAACTCG TCAACAGAAT CCTGTTTAAA 
GCTTTGCAAG AAAAGGTTTC GGATATTCAT ATCGAACCAC AAGAGGAAAA CTTACGCATT 
CGCTTCCGTA AGGATGGGGT ACTGCATGAG GCTTTTGACC CTGTACCTAA AAAAATCATT 
CCGGCGGTGA CAGCCCGATT TAAAATCATT TCCAATCTTG ACATCGCGGA AAGGCGTTTA 
CCTCAAGATG GACGCATCCG TCGTTTATTT GAAGGACGGA AAGTTGACTT CCGGGTGAAT 
ACCTTACCCA GTCGCTATGG GGAAAAGGTG GTGTTACGGA TTCTGGACAA CTCTTCTACC 
CAACTAGGGT TGAATAAGTT AATTACTGAT CCAGAGACTT TGCATATTGT CCAGGATATC 
GTCAGCAAGC CCTTTGGCTT GATTTTGGTA ACTGGTCCGA CTGGTTCTGG TAAAACGACT 
TCGTTGTATT CGGCATTGGC AGAAAAGAAC GATCCAGGAA TTAACATTAG TACGGTAGAA 
GACCCGATTG AATATAGTTT GCCAGGGATT ACCCAAGTAC AGGTAATTCG GGAAAAAGGG 
TTGGATTTTT CCACAGCATT GCGGGCGTTC TTGCGTCAAG ATCCCGATGT GTTGCTTGTG 
GGTGAAACAC GGGATAAAGA AACGGCAAAA ACAGCGATTG AAGCGGCTTT AACAGGTCAC 
TTAGTATTAA CTACCTTACA CACTAATGAT GCGCCTGGTG CGATCGCACG TCTAGGAGAA 
ATGGGAATTG AACCCTTCAT GGTTTCCAGT TCCCTAATTG GTGTTTTGGC ACAACGTTTA 
GTGCGTCGAG TTTGTTCACA ATGTCGAATT CCCTACACTC CCACTACTGA AGAACTGGCT 
CGTTATGGTC TGTCAGCATC CAAAGAAACA TCAGTAACTT TTTACAAGGC TAATTCCTTA 
CCTCCAGAAT CTATAGCAGA AGCTAAAACC AAAAATGAAA TCTGTGGGGC TTGTAATGGC 
ATTGGGTATA AAGGACGTTG TGGTGTTTAT GAAGTTATGC GAGTCACAGA AAACCTCCAA 
ACTCTCATCA ACCAAGAAGC ACCCACAGAA CGCATTAAAG AAGTAGCTGT AGAAGAAGGT 
ATGAAAACCT TGCTTGCTTA CAGTCTAGAT TTAGTGCGTC AAGGTTCTAC AACTCTGGAG 
GAAGTAGAGC GCGTAACCTT TACTGATACA GGTTTGGAAG CTGAATTAAA AGCCAAACGT 
AAGAGTGGTC TAACTTGTAA AACTTGTGAT GCCACATTAC AACCAGAATG GCTCGATTGT 
CCCTACTGTA TGACACCTCG TTTTCAAGAT TAG 

 

Protein sequence

MTYSSPQRTS TALTTKTQFS PFGNHLVQSG YVNTEQMKQA LIESRKSGKK LIDVLELITG 
QQLSAEFIRE HKKQHLFELK ILYGVESVDP EVNQIGNLMV GQLIDSLIPV DVCRRHRLVP 
LWKREDQIPP YVLVAMVEPD NLDASDDLNR ILRNKNLSLQ RMVITQEDYQ HLINKYLDEL 
AIREKEKEQK RDTDINQDIK YLEDQDIEEF GEDKDADINA SIKDAEDAPI IKLVNRILFK 
ALQEKVSDIH IEPQEENLRI RFRKDGVLHE AFDPVPKKII PAVTARFKII SNLDIAERRL 
PQDGRIRRLF EGRKVDFRVN TLPSRYGEKV VLRILDNSST QLGLNKLITD PETLHIVQDI 
VSKPFGLILV TGPTGSGKTT SLYSALAEKN DPGINISTVE DPIEYSLPGI TQVQVIREKG 
LDFSTALRAF LRQDPDVLLV GETRDKETAK TAIEAALTGH LVLTTLHTND APGAIARLGE 
MGIEPFMVSS SLIGVLAQRL VRRVCSQCRI PYTPTTEELA RYGLSASKET SVTFYKANSL 
PPESIAEAKT KNEICGACNG IGYKGRCGVY EVMRVTENLQ TLINQEAPTE RIKEVAVEEG 
MKTLLAYSLD LVRQGSTTLE EVERVTFTDT GLEAELKAKR KSGLTCKTCD ATLQPEWLDC 
PYCMTPRFQD