Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aazo_1836 |
Symbol | |
ID | 9339629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | 'Nostoc azollae' 0708 |
Kingdom | Bacteria |
Replicon accession | NC_014248 |
Strand | - |
Start bp | 1904695 |
End bp | 1906263 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | secretion protein HlyD family protein |
Protein accession | YP_003721062 |
Protein GI | 298490885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.161085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAC TTAATGCTAA CCAAATCAAT AGCAACGGCA ATGGAAAAAA TCAAAGTCTA CAGTTGCTGA CACCTCGCAA AAAAGCTAAA ATAGCATCCT TAACTAATGC CTATAAGCAG GATGAATTTG AACAGTCTAT AGTCTTATGT CAATCACCAA TATGGTCACG TACCATCATG ATTACCTTGA TGGTTGTAGC CTGTTTTGGA GTTGGGTGGG CTTATTTTTC CAAACTTGAA CAAGTAGTTC CAGCAACAGG TCAATTAAAA CCAGAGGGAA CAGTCAAAGA AGTACAAGCT CCCATTAATG GAGTTGTAAA ATCTGTTTAT GTAAAAGATG GTCAAACCGT AAAAAAAGGA GACTTGATCT TAACATTTGA ATCGGTTGCA ACTTTAGCTG AGTTAAGTTC CTTAAATAAA ATTCGCGTTG CTTTAACTAA AGAAAACGAT ATTTATCGTC GCTTGATGGG AGCAAGCACA GGTATCACCT CAGAGTTGGA CTTTTTACGT AGTAACTTGT CACCAGAATC TGCTTTTCTC CTTAAACATC GAGCATCATT AGTAACAGAA AATGAACTAC TGCGTTCTCA ATTAAAGAAT ACTCCACCAG AAAATAGCAA CGGAATTGAT GAACAACAAC GCCTCATAGC AGCGAAGAGG GAATTAGATT CCCGATCTAG CGCAGCTAAA TTAGAAGTTG AAAAAATCAG GAAGCAACTA TCACAAACCA TCGTCAAAAT AAGAAATACT CAAGATAGTT TAGCCATTCA AACACAGATT TTGGATAAAC TCAAAATATT AGCAGTCGAA GGTGGAATTT CTCAACTGCA ATATCTCAAT CAGCAACAAC AAGTACAAAC TTTAAAAGCA GAAATATCAC AATTAACTGA GGAAGAAAAA CGCCTCCAGC TTGATATTCA AAAAGGACAG CAGGAAGTAA CTAATACAGT AGCAGTTACT GATAAAAACG TTCTGGAGCA GATAGCTAAC AACAAAAAGA GGATTGCCGA AATAGACAGC CAATTTATGA AGATTATTCT GGATAATGAG CAGAAATTGG GAGATATTAA CAGTAAGATT TCCCAGACGC AATTAAATGT TAGATATCAA GAGGTCCGTG CTCCTATAGA AGGGACAGTG TTCGATATGC AAGCCAAAAA TCCTGGGTTT GTAGCAAACA CCACCCAAAA ATTATTGCAA ATTGTACCTA ATGATAAATA TGTTGCTGAA GTATTTATCA CCAATAAAGA TATTGGATTT GTAAGGGTAG GTATGAACGT AGATGTGAGA ATTGATTCCT TTCCTTTTAG CGAATTTGGA GATATTAAAG GTCAGGTGAT TGATATCGGT TCAGATGCTT TACCCCCAGA TCAAATTCAT CAATTTTATA GATTTCCAGC CAGAGTTAGC TTGCATAAAC AAAAACTAGA AACTCAAGGC AAAAAGATAG CATTACAGTC TGGGATGTCA ATTACCGGTA ATATTAAAGT TCGCGAGGAA CGTACTGTAC TTAGTTTGTT CACGCAGATG TTTACCAAGC AAGTGGAGAG CTTGAACGAA GTGCGTTAA
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Protein sequence | MTQLNANQIN SNGNGKNQSL QLLTPRKKAK IASLTNAYKQ DEFEQSIVLC QSPIWSRTIM ITLMVVACFG VGWAYFSKLE QVVPATGQLK PEGTVKEVQA PINGVVKSVY VKDGQTVKKG DLILTFESVA TLAELSSLNK IRVALTKEND IYRRLMGAST GITSELDFLR SNLSPESAFL LKHRASLVTE NELLRSQLKN TPPENSNGID EQQRLIAAKR ELDSRSSAAK LEVEKIRKQL SQTIVKIRNT QDSLAIQTQI LDKLKILAVE GGISQLQYLN QQQQVQTLKA EISQLTEEEK RLQLDIQKGQ QEVTNTVAVT DKNVLEQIAN NKKRIAEIDS QFMKIILDNE QKLGDINSKI SQTQLNVRYQ EVRAPIEGTV FDMQAKNPGF VANTTQKLLQ IVPNDKYVAE VFITNKDIGF VRVGMNVDVR IDSFPFSEFG DIKGQVIDIG SDALPPDQIH QFYRFPARVS LHKQKLETQG KKIALQSGMS ITGNIKVREE RTVLSLFTQM FTKQVESLNE VR
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