Gene Aazo_1778 details

Gene Information

• Locus tag: Aazo_1778
• ID: 9339571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: -
• Start bp: 1845624
• End bp: 1846388
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 44%
• Product: ABC transporter-like protein protein
• Protein accession: YP_003721025
• Protein GI: 298490848

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.837422
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACATCCT TAACTTCTCA TCCCCAAATT TCCATTTCCC AACCGCATCA ATCTGTAGTT 
GAAGTACAAA ATCTTGTATA TGCCTATCCT GACCAACAAC CAGTATTAAC AGAAATTTCC 
TTTACATTAA ATGTAGCCGA TCGCGTCGCC TTAATTGGTG CAACCGGTTC AGGAAAAAGC 
ACACTCCTAG AAAACCTCAT CGGACTCAAA CAACCCCAAA GCGGTAAAAT TACCATCAAT 
GGTATTCCCA TAGCCCCAAA CACCCTACCC CAAATTCGGC GACAAATAGG TTTCAGCTTC 
CAAGATGCCA ACGACCAATT ATTTATGCCC ACAATCTTAG AAGACATCAC CTTCGGTCCC 
CGTAACTATG GTATTTCCCA CGTAGCAGCC AAAGATAAGG CACAGCAAAT ATTAGCTGAA 
TTTGGACTAG AACAATACGC CCACCGTTCC GCCTACGAAC TTTCCGGAGG ACAAAGACGA 
CTAGCGGCTC TAGCAGCCAT CTTAGCCCTA GACCCAGCCA TTCTCATCTT AGACGAACCC 
ACCAACGGAC TAGACCCCGC CTGGCGAAGA CATTTAGCCC AAATATTATT AAAATTACCA 
GTGCAAGTTA TATTAATAGC CTCCCATGAT CTTCACTGGT TAGGAAAAGT CACTCAACGC 
GCCCTCGTCC TGTCAGGTGG TAGCATTCAA ATAGACAGCC ATATTCAACC ATTGTTAAAA 
GATGGCACAA ACTTAGAAAG ATTCGGTTTA CCAATAGATT GGTAA 

 

Protein sequence

MTSLTSHPQI SISQPHQSVV EVQNLVYAYP DQQPVLTEIS FTLNVADRVA LIGATGSGKS 
TLLENLIGLK QPQSGKITIN GIPIAPNTLP QIRRQIGFSF QDANDQLFMP TILEDITFGP 
RNYGISHVAA KDKAQQILAE FGLEQYAHRS AYELSGGQRR LAALAAILAL DPAILILDEP 
TNGLDPAWRR HLAQILLKLP VQVILIASHD LHWLGKVTQR ALVLSGGSIQ IDSHIQPLLK 
DGTNLERFGL PIDW